Personal tools

CL:0000031: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=neuroblast
|name=neuroblast
|namespace=cell
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:27, 12 September 2014

Name:neuroblast
Namespace:FANTOM
Xrefs:
links:

BTO:0000930
FBbt:00005146

FMA:70563


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000047(neuronal stem cell),CL:0000055(non-terminally differentiated cell)



Children


is a:CL:0000337 (neuroblast (sensu Vertebrata))
derives from:FF:0300105 (mouse neurospheres sample)
develops from:CL:0000540 (neuron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000031 (neuroblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.83e-98FFCP PHASE1:Hg19::chr8:494169..494176,+#_6744e5f5c64c3952dc7858450187807bp@chr8:494169..494176, +
1.83e-98FFCP PHASE2:Hg19::chr6:121759714..121759721,+#_6744e5f5c64c3952dc7858450187807bp@chr6:121759714..121759721, +
1.83e-98FFCP PHASE1:Hg19::chr1:178235815..178235824,-#_6744e5f5c64c3952dc7858450187807bp@chr1:178235815..178235824, -
1.83e-98FFCP PHASE1:Hg19::chr7:89853761..89853768,+#_6744e5f5c64c3952dc7858450187807bp@chr7:89853761..89853768, +
1.83e-98FFCP PHASE2:Hg19::chr8:494169..494176,+#_6744e5f5c64c3952dc7858450187807bp@chr8:494169..494176, +
1.83e-98FFCP PHASE1:Hg19::chr6:121759714..121759721,+#_6744e5f5c64c3952dc7858450187807bp@chr6:121759714..121759721, +
1.83e-98FFCP PHASE2:Hg19::chr7:93269596..93269602,+#_6744e5f5c64c3952dc7858450187807bp@chr7:93269596..93269602, +
1.83e-98FFCP PHASE2:Hg19::chr1:178235815..178235824,-#_6744e5f5c64c3952dc7858450187807bp@chr1:178235815..178235824, -
1.83e-98FFCP PHASE2:Hg19::chr7:89853761..89853768,+#_6744e5f5c64c3952dc7858450187807bp@chr7:89853761..89853768, +
1.83e-98FFCP PHASE1:Hg19::chr7:93269596..93269602,+#_6744e5f5c64c3952dc7858450187807bp@chr7:93269596..93269602, +
1.83e-98FFCP PHASE2:Hg19::chr3:162430587..162430591,+#_6744e5f5c64c3952dc7858450187807bp@chr3:162430587..162430591, +
1.83e-98FFCP PHASE2:Hg19::chr12:23738971..23738975,+#_6744e5f5c64c3952dc7858450187807bp@chr12:23738971..23738975, +
1.83e-98FFCP PHASE1:Hg19::chr10:74804784..74804793,-#_6744e5f5c64c3952dc7858450187807bp@chr10:74804784..74804793, -
1.83e-98FFCP PHASE1:Hg19::chr12:23738971..23738975,+#_6744e5f5c64c3952dc7858450187807bp@chr12:23738971..23738975, +
1.83e-98FFCP PHASE2:Hg19::chr10:74804784..74804793,-#_6744e5f5c64c3952dc7858450187807bp@chr10:74804784..74804793, -
1.83e-98FFCP PHASE1:Hg19::chr3:162430587..162430591,+#_6744e5f5c64c3952dc7858450187807bp@chr3:162430587..162430591, +
6.82e-78FFCP PHASE2:Hg19::chr21:33976809..33976828,-#_420f8e7ea2570fa038dbe68bc2eafaa5p9@C21orf59
6.82e-78FFCP PHASE1:Hg19::chr21:33976809..33976828,-#_420f8e7ea2570fa038dbe68bc2eafaa5p9@C21orf59
2.58e-74FFCP PHASE2:Hg19::chr7:125557914..125557920,+#_1dd56798b7ef08ecf6eed0929b80db40p1@ENST00000411856
2.58e-74FFCP PHASE2:Hg19::chr1:232254205..232254216,+#_1dd56798b7ef08ecf6eed0929b80db40p@chr1:232254205..232254216, +
2.58e-74FFCP PHASE1:Hg19::chr1:232254205..232254216,+#_1dd56798b7ef08ecf6eed0929b80db40p@chr1:232254205..232254216, +
2.58e-74FFCP PHASE2:Hg19::chr3:65939393..65939412,+#_1dd56798b7ef08ecf6eed0929b80db40p@chr3:65939393..65939412, +
2.58e-74FFCP PHASE1:Hg19::chr4:187163434..187163439,+#_1dd56798b7ef08ecf6eed0929b80db40p@chr4:187163434..187163439, +
2.58e-74FFCP PHASE1:Hg19::chr7:125557914..125557920,+#_1dd56798b7ef08ecf6eed0929b80db40p1@ENST00000411856
2.58e-74FFCP PHASE2:Hg19::chr4:113571661..113571692,-#_1dd56798b7ef08ecf6eed0929b80db40p1@ENST00000510655
2.58e-74FFCP PHASE2:Hg19::chr2:210164412..210164415,+#_1dd56798b7ef08ecf6eed0929b80db40p@chr2:210164412..210164415, +
2.58e-74FFCP PHASE1:Hg19::chr2:210164412..210164415,+#_1dd56798b7ef08ecf6eed0929b80db40p@chr2:210164412..210164415, +
2.58e-74FFCP PHASE1:Hg19::chr3:65939393..65939412,+#_1dd56798b7ef08ecf6eed0929b80db40p@chr3:65939393..65939412, +
2.58e-74FFCP PHASE1:Hg19::chr4:113571661..113571692,-#_1dd56798b7ef08ecf6eed0929b80db40p1@ENST00000510655
2.58e-74FFCP PHASE2:Hg19::chr4:187163434..187163439,+#_1dd56798b7ef08ecf6eed0929b80db40p@chr4:187163434..187163439, +
3.31e-74FFCP PHASE1:Hg19::chr13:93868779..93868791,+#_dacb97e5322c6a3036d5774fc16253a6p@chr13:93868779..93868791, +
3.31e-74FFCP PHASE2:Hg19::chr13:93868779..93868791,+#_dacb97e5322c6a3036d5774fc16253a6p@chr13:93868779..93868791, +
4.26e-74FFCP PHASE1:Hg19::chr6:132234089..132234094,+#_bdc4e18b4e02b24e7e4113affb477750p@chr6:132234089..132234094, +
4.26e-74FFCP PHASE2:Hg19::chr6:132234089..132234094,+#_bdc4e18b4e02b24e7e4113affb477750p@chr6:132234089..132234094, +
5.47e-74FFCP PHASE1:Hg19::chrX:16141567..16141572,+#_02c9f3e3d7a15da9abbcc558cc0b6759p4@GRPR
5.47e-74FFCP PHASE1:Hg19::chr13:54688155..54688160,-#_02c9f3e3d7a15da9abbcc558cc0b6759p@chr13:54688155..54688160, -
5.47e-74FFCP PHASE2:Hg19::chrX:16141567..16141572,+#_02c9f3e3d7a15da9abbcc558cc0b6759p4@GRPR
5.47e-74FFCP PHASE2:Hg19::chr13:54688155..54688160,-#_02c9f3e3d7a15da9abbcc558cc0b6759p@chr13:54688155..54688160, -
2.2e-70FFCP PHASE1:Mm9::chr8:125944624..125944663,+#_bef279b22c12d86316d98e1902da9a11p@chr8:125944624..125944663, +
2.2e-70FFCP PHASE2:Mm9::chr8:125944624..125944663,+#_bef279b22c12d86316d98e1902da9a11p@chr8:125944624..125944663, +
2.83e-66FFCP PHASE2:Hg19::chr4:150954096..150954098,+#_a256c52434084b82bcf891f6eee947b2p@chr4:150954096..150954098, +
2.83e-66FFCP PHASE1:Hg19::chr13:51745257..51745261,+#_a256c52434084b82bcf891f6eee947b2p@chr13:51745257..51745261, +
2.83e-66FFCP PHASE1:Hg19::chrY:28817276..28817283,-#_a256c52434084b82bcf891f6eee947b2p@chrY:28817276..28817283, -
2.83e-66FFCP PHASE2:Hg19::chr19:33542309..33542310,+#_a256c52434084b82bcf891f6eee947b2p1@ENST00000463585
2.83e-66FFCP PHASE1:Hg19::chr15:53409038..53409040,+#_a256c52434084b82bcf891f6eee947b2p@chr15:53409038..53409040, +
2.83e-66FFCP PHASE1:Hg19::chr4:188918405..188918406,+#_a256c52434084b82bcf891f6eee947b2p@chr4:188918405..188918406, +
2.83e-66FFCP PHASE1:Hg19::chr19:33542309..33542310,+#_a256c52434084b82bcf891f6eee947b2p1@ENST00000463585
2.83e-66FFCP PHASE2:Hg19::chr4:188918405..188918406,+#_a256c52434084b82bcf891f6eee947b2p@chr4:188918405..188918406, +
2.83e-66FFCP PHASE2:Hg19::chr15:53409038..53409040,+#_a256c52434084b82bcf891f6eee947b2p@chr15:53409038..53409040, +
2.83e-66FFCP PHASE2:Hg19::chr20:31396411..31396416,+#_a256c52434084b82bcf891f6eee947b2p15@DNMT3B
2.83e-66FFCP PHASE1:Hg19::chr4:150954096..150954098,+#_a256c52434084b82bcf891f6eee947b2p@chr4:150954096..150954098, +
2.83e-66FFCP PHASE2:Hg19::chr13:51745257..51745261,+#_a256c52434084b82bcf891f6eee947b2p@chr13:51745257..51745261, +
2.83e-66FFCP PHASE2:Hg19::chrY:28817276..28817283,-#_a256c52434084b82bcf891f6eee947b2p@chrY:28817276..28817283, -
2.83e-66FFCP PHASE1:Hg19::chr20:31396411..31396416,+#_a256c52434084b82bcf891f6eee947b2p15@DNMT3B
8.15e-60FFCP PHASE2:Hg19::chr9:76707423..76707428,+#_7d603b24850a62c45973b0250b33f909p@chr9:76707423..76707428, +
8.15e-60FFCP PHASE1:Hg19::chr9:12948720..12948724,+#_7d603b24850a62c45973b0250b33f909p@chr9:12948720..12948724, +
8.15e-60FFCP PHASE1:Hg19::chr9:76707423..76707428,+#_7d603b24850a62c45973b0250b33f909p@chr9:76707423..76707428, +
8.15e-60FFCP PHASE2:Hg19::chr9:100199938..100199951,-#_7d603b24850a62c45973b0250b33f909p@chr9:100199938..100199951, -
8.15e-60FFCP PHASE1:Hg19::chr9:100199938..100199951,-#_7d603b24850a62c45973b0250b33f909p@chr9:100199938..100199951, -
8.15e-60FFCP PHASE2:Hg19::chr9:12948720..12948724,+#_7d603b24850a62c45973b0250b33f909p@chr9:12948720..12948724, +
9.96e-60FFCP PHASE1:Hg19::chr12:132280681..132280688,+#_9f5765dedbff6e75e6fc22f5217bf282p3@SFSWAP
9.96e-60FFCP PHASE2:Hg19::chr12:132280681..132280688,+#_9f5765dedbff6e75e6fc22f5217bf282p3@SFSWAP
1.22e-59FFCP PHASE1:Hg19::chr1:114574998..114575000,+#_87d60212746790fd6144658cc39c6417p@chr1:114574998..114575000, +
1.22e-59FFCP PHASE1:Hg19::chr5:123833031..123833035,+#_87d60212746790fd6144658cc39c6417p@chr5:123833031..123833035, +
1.22e-59FFCP PHASE2:Hg19::chr12:7942020..7942031,+#_87d60212746790fd6144658cc39c6417p2@NANOG
1.22e-59FFCP PHASE1:Hg19::chr12:7942020..7942031,+#_87d60212746790fd6144658cc39c6417p2@NANOG
1.22e-59FFCP PHASE2:Hg19::chr4:111540901..111540905,+#_87d60212746790fd6144658cc39c6417p@chr4:111540901..111540905, +
1.22e-59FFCP PHASE2:Hg19::chr1:114574998..114575000,+#_87d60212746790fd6144658cc39c6417p@chr1:114574998..114575000, +
1.22e-59FFCP PHASE1:Hg19::chr4:111540901..111540905,+#_87d60212746790fd6144658cc39c6417p@chr4:111540901..111540905, +
1.22e-59FFCP PHASE2:Hg19::chr5:123833031..123833035,+#_87d60212746790fd6144658cc39c6417p@chr5:123833031..123833035, +
1.49e-59FFCP PHASE2:Hg19::chr2:76920664..76920667,+#_dd53237d81c39900f12ae6142b164713p@chr2:76920664..76920667, +
1.49e-59FFCP PHASE1:Hg19::chr2:76920664..76920667,+#_dd53237d81c39900f12ae6142b164713p@chr2:76920664..76920667, +
1.49e-59FFCP PHASE1:Hg19::chr14:84428225..84428229,+#_dd53237d81c39900f12ae6142b164713p@chr14:84428225..84428229, +
1.49e-59FFCP PHASE1:Hg19::chr7:99986543..99986546,+#_dd53237d81c39900f12ae6142b164713p@chr7:99986543..99986546, +
1.49e-59FFCP PHASE2:Hg19::chr7:99986543..99986546,+#_dd53237d81c39900f12ae6142b164713p@chr7:99986543..99986546, +
1.49e-59FFCP PHASE2:Hg19::chr14:84428225..84428229,+#_dd53237d81c39900f12ae6142b164713p@chr14:84428225..84428229, +
1.82e-59FFCP PHASE1:Hg19::chr11:27657270..27657275,-#_65fe5d598c3e820c39a327a36b8d966ep@chr11:27657270..27657275, -
1.82e-59FFCP PHASE2:Hg19::chr11:27657270..27657275,-#_65fe5d598c3e820c39a327a36b8d966ep@chr11:27657270..27657275, -
2.72e-59FFCP PHASE2:Hg19::chr4:170861392..170861432,+#_55495b15f092ed01aa45a711f67ad46bp@chr4:170861392..170861432, +
2.72e-59FFCP PHASE1:Hg19::chr4:170861392..170861432,+#_55495b15f092ed01aa45a711f67ad46bp@chr4:170861392..170861432, +
5.43e-59FFCP PHASE1:Hg19::chr12:86727911..86727925,-#_b1c745dc7217009a2ef4d6436c82104ep@chr12:86727911..86727925, -
5.43e-59FFCP PHASE2:Hg19::chr12:86727911..86727925,-#_b1c745dc7217009a2ef4d6436c82104ep@chr12:86727911..86727925, -
1.11e-58FFCP PHASE1:Mm9::chr7:109167666..109167667,+#_47eac00c6d538a506e7d8690f15254a8p@chr7:109167666..109167667, +
1.11e-58FFCP PHASE2:Mm9::chr7:109167666..109167667,+#_47eac00c6d538a506e7d8690f15254a8p@chr7:109167666..109167667, +
1.36e-58FFCP PHASE1:Hg19::chr1:213164012..213164023,+#_9cea98748f71246825b05ffade03f2bcp@chr1:213164012..213164023, +
1.36e-58FFCP PHASE2:Hg19::chr1:213164012..213164023,+#_9cea98748f71246825b05ffade03f2bcp@chr1:213164012..213164023, +
2.28e-56FFCP PHASE2:Hg19::chr7:23146271..23146285,+#_3a1c6eaeada09a104ad8849618941532p4@KLHL7
2.28e-56FFCP PHASE1:Hg19::chr7:23146271..23146285,+#_3a1c6eaeada09a104ad8849618941532p4@KLHL7
8.29e-55FFCP PHASE2:Mm9::chr14:26427427..26427439,+#_cf3e4d070f26b7367d367c23614ec781p22@Zmiz1
8.29e-55FFCP PHASE1:Mm9::chr14:26427427..26427439,+#_cf3e4d070f26b7367d367c23614ec781p22@Zmiz1
2.41e-54FFCP PHASE2:Mm9::chr13:9279895..9279899,+#_9b7a23278d16da4d10446ca6f48327afp@chr13:9279895..9279899, +
2.41e-54FFCP PHASE1:Mm9::chr13:9279895..9279899,+#_9b7a23278d16da4d10446ca6f48327afp@chr13:9279895..9279899, +
7.68e-54FFCP PHASE2:Hg19::chr1:33231268..33231284,+#_2c150749c1c1344cb5a83cd6141d011bp20@KIAA1522
7.68e-54FFCP PHASE1:Hg19::chr1:33231268..33231284,+#_2c150749c1c1344cb5a83cd6141d011bp20@KIAA1522
4.63e-53FFCP PHASE2:Hg19::chr17:25672542..25672555,-#_a3663eaa8b1d317a5a084631d27260ecp@chr17:25672542..25672555, -
4.63e-53FFCP PHASE1:Hg19::chr17:25672542..25672555,-#_a3663eaa8b1d317a5a084631d27260ecp@chr17:25672542..25672555, -
1.37e-52FFCP PHASE2:Hg19::chr19:55823957..55823960,-#_512936cc053575cec6583c409a659006p@chr19:55823957..55823960, -
1.37e-52FFCP PHASE1:Hg19::chr19:55823957..55823960,-#_512936cc053575cec6583c409a659006p@chr19:55823957..55823960, -
1.31e-50FFCP PHASE1:Mm9::chr8:125944694..125944740,+#_3ba015a48c53ac24549148c545a578c2p@chr8:125944694..125944740, +
1.31e-50FFCP PHASE2:Mm9::chr8:125944694..125944740,+#_3ba015a48c53ac24549148c545a578c2p@chr8:125944694..125944740, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000031&oldid=3275156"