Personal tools

CL:0000133: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0000133 |name=neurectodermal cell |namespace=cell |def="Ectoderm destined to be nervous tissue." [GOC:tfm, ISBN:068340007X] |xref= |is_a=CL:0000221 |synonym...")
 
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000133
|alt_id=
|name=neurectodermal cell
|namespace=cell
|def="Ectoderm destined to be nervous tissue." [GOC:tfm, ISBN:068340007X]
|xref=
|is_a=CL:0000221
|synonym="neurectoderm cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Ectoderm destined to be nervous tissue." [GOC:tfm, ISBN:068340007X]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000133
|is_a=CL:0000221
|is_obsolete=
|located_in=
|located_in=
|name=neurectodermal cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym="neurectoderm cell" EXACT []
|union_of=
|xref=
}}
}}

Latest revision as of 16:30, 12 September 2014

Name:neurectodermal cell
Namespace:FANTOM
Definition:"Ectoderm destined to be nervous tissue." [GOC:tfm, ISBN:068340007X]
Synonyms: "neurectoderm cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000221(ectodermal cell)



Children


develops from:CL:0000030 (glioblast),CL:0000047 (neuronal stem cell),CL:0000095 (neuron associated cell),CL:0000333 (migratory neural crest cell),CL:0000710 (neurecto-epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000133 (neurectodermal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data