CL:0000342: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="Any animal cell containing pigment granules." [GOC:tfm, ISBN:0721662544] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000342 | |||
|is_a=CL:0000147 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=pigment cell (sensu Vertebrata) | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} |
Latest revision as of 16:33, 12 September 2014
Name: | pigment cell (sensu Vertebrata) |
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Namespace: | FANTOM |
Definition: | "Any animal cell containing pigment granules." [GOC:tfm, ISBN:0721662544] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000147(pigment cell) |
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Children
is a: | CL:0002565 (iris pigment epithelial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11610-120I8
- 11691-122I8
Mouse (Mus musculus)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11610-120I8
- 11691-122I8
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000342 (pigment cell (sensu Vertebrata)), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data