CL:0000342: Difference between revisions
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|name=pigment cell (sensu Vertebrata) | |name=pigment cell (sensu Vertebrata) | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 16:33, 12 September 2014
Name: | pigment cell (sensu Vertebrata) |
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Namespace: | FANTOM |
Definition: | "Any animal cell containing pigment granules." [GOC:tfm, ISBN:0721662544] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000147(pigment cell) |
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Children
is a: | CL:0002565 (iris pigment epithelial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11610-120I8
- 11691-122I8
Mouse (Mus musculus)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11610-120I8
- 11691-122I8
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000342 (pigment cell (sensu Vertebrata)), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data