CL:0000763: Difference between revisions
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|located_in= | |located_in= | ||
|name=myeloid cell | |name=myeloid cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 16:36, 12 September 2014
Name: | myeloid cell | ||
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Namespace: | FANTOM | ||
Definition: | "A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage." [GOC:add] | ||
Xrefs: |
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Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000988(hematopoietic cell) |
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develops_from: | CL:0000049(common myeloid progenitor) |
Children
is a: | CL:0000040 (monoblast),CL:0000050 (megakaryocyte-erythroid progenitor cell),CL:0000553 (megakaryocyte progenitor cell),CL:0000556 (megakaryocyte),CL:0000557 (granulocyte monocyte progenitor cell),CL:0000559 (promonocyte),CL:0000764 (erythroid lineage cell),CL:0000766 (myeloid leukocyte),CL:0000831 (mast cell progenitor),CL:0000835 (myeloblast),CL:0000836 (promyelocyte),CL:0001029 (common dendritic progenitor),CL:0002009 (macrophage dendritic cell progenitor),CL:0002028 (basophil mast progenitor cell),CL:0002193 (myelocyte) |
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derives from: | FF:0100740 (myeloid leukemia cell line sample) |
develops from: | CL:0000453 (Langerhans cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10454-106G4 (chronic myelogenous leukemia cell line:K562)
- 10699-109G6 (acute myeloid leukemia (FAB M7) cell line:M-MOK)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10718-109I7 (biphenotypic B myelomonocytic leukemia cell line:MV-4-11)
- 10731-110B2
... further results Mouse (Mus musculus)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10454-106G4 (chronic myelogenous leukemia cell line:K562)
- 10699-109G6 (acute myeloid leukemia (FAB M7) cell line:M-MOK)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10718-109I7 (biphenotypic B myelomonocytic leukemia cell line:MV-4-11)
- 10731-110B2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000763 (myeloid cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.01e-115 | FFCP PHASE2:Hg19::chr11:47399920..47399931,-#_3032f4ab69c1699984e81500f0a91621 | p7@SPI1 |
5.01e-115 | FFCP PHASE1:Hg19::chr11:47399920..47399931,-#_3032f4ab69c1699984e81500f0a91621 | p7@SPI1 |
6.88e-112 | FFCP PHASE2:Hg19::chr11:47400045..47400060,-#_dda8c0334841f3908ac6e79aacc144eb | p6@SPI1 |
6.88e-112 | FFCP PHASE1:Hg19::chr11:47400045..47400060,-#_dda8c0334841f3908ac6e79aacc144eb | p6@SPI1 |
1.87e-103 | FFCP PHASE2:Hg19::chr8:55074639..55074655,+#_f046fa7bfd5a00d7c3b620a5a33dda5c | p@chr8:55074639..55074655, + |
1.87e-103 | FFCP PHASE1:Hg19::chr8:55074639..55074655,+#_f046fa7bfd5a00d7c3b620a5a33dda5c | p@chr8:55074639..55074655, + |
5.28e-102 | FFCP PHASE2:Hg19::chr2:109204876..109204889,+#_a1408ce8b82422947413d52f4d4d0d72 | p7@LIMS1 |
5.28e-102 | FFCP PHASE1:Hg19::chr2:109204876..109204889,+#_a1408ce8b82422947413d52f4d4d0d72 | p7@LIMS1 |
3.01e-101 | FFCP PHASE1:Hg19::chr19:54876689..54876707,-#_8e7835a68cea65df22c87de6b0d3ed51 | p6@LAIR1 |
3.01e-101 | FFCP PHASE2:Hg19::chr19:54876689..54876707,-#_8e7835a68cea65df22c87de6b0d3ed51 | p6@LAIR1 |
2.92e-100 | FFCP PHASE2:Hg19::chr17:72528538..72528554,+#_1b693b8a8d37cf2b94c5252f1bee2044 | p@chr17:72528538..72528554, + |
2.92e-100 | FFCP PHASE1:Hg19::chr17:72528538..72528554,+#_1b693b8a8d37cf2b94c5252f1bee2044 | p@chr17:72528538..72528554, + |
1.71e-99 | FFCP PHASE2:Hg19::chr11:47400032..47400043,-#_d6742f54535a4069346d0843a03751ef | p5@SPI1 |
1.71e-99 | FFCP PHASE1:Hg19::chr11:47400032..47400043,-#_d6742f54535a4069346d0843a03751ef | p5@SPI1 |
3.09e-99 | FFCP PHASE2:Hg19::chr6:137105174..137105195,+#_45d2cf136ecb1d6cffeb5937035c9f34 | p@chr6:137105174..137105195, + |
3.09e-99 | FFCP PHASE1:Hg19::chr6:137105174..137105195,+#_45d2cf136ecb1d6cffeb5937035c9f34 | p@chr6:137105174..137105195, + |
3.6e-99 | FFCP PHASE1:Hg19::chr19:55084438..55084495,+#_6a56fe2896c84a4c4494d8df30134f78 | p2@LILRA2 |
3.6e-99 | FFCP PHASE2:Hg19::chr19:55084438..55084495,+#_6a56fe2896c84a4c4494d8df30134f78 | p2@LILRA2 |
5.23e-99 | FFCP PHASE1:Hg19::chr12:118796868..118796885,-#_341d50233bcb76e3d23a02891291e4ca | p6@TAOK3 |
5.23e-99 | FFCP PHASE2:Hg19::chr12:118796868..118796885,-#_341d50233bcb76e3d23a02891291e4ca | p6@TAOK3 |
2.14e-98 | FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_c2791c8b2bdf9cb89fc6d39c594cfbda | p7@EMILIN2 |
2.14e-98 | FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_c2791c8b2bdf9cb89fc6d39c594cfbda | p7@EMILIN2 |
2.31e-97 | FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_0427e415d4d48dff7268cc808ba91e71 | p@chr15:65174546..65174583, - |
2.31e-97 | FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_0427e415d4d48dff7268cc808ba91e71 | p@chr15:65174546..65174583, - |
4.87e-97 | FFCP PHASE2:Hg19::chr20:35202667..35202682,+#_2f6973755ecd04aa4af228f7e2e089ba | p4@C20orf24 |
4.87e-97 | FFCP PHASE1:Hg19::chr20:35202667..35202682,+#_2f6973755ecd04aa4af228f7e2e089ba | p4@C20orf24 |
1.04e-96 | FFCP PHASE1:Hg19::chr13:108922429..108922446,+#_78181d48d73a4e2f1a998e6436b8380b | p6@TNFSF13B |
1.04e-96 | FFCP PHASE2:Hg19::chr13:108922429..108922446,+#_78181d48d73a4e2f1a998e6436b8380b | p6@TNFSF13B |
1.68e-96 | FFCP PHASE1:Hg19::chr11:47399947..47399961,-#_7583cd17241380d7a7d2488a62294d95 | p3@SPI1 |
1.68e-96 | FFCP PHASE2:Hg19::chr11:47399947..47399961,-#_7583cd17241380d7a7d2488a62294d95 | p3@SPI1 |
3.76e-96 | FFCP PHASE2:Hg19::chr17:72709134..72709145,-#_96a91dfb45c6747ca817fdce8b1d74d1 | p2@CD300LF |
3.76e-96 | FFCP PHASE1:Hg19::chr17:72709134..72709145,-#_96a91dfb45c6747ca817fdce8b1d74d1 | p2@CD300LF |
6.69e-96 | FFCP PHASE1:Hg19::chr19:36400209..36400286,-#_5f69e00e7234b78e5e9ebe0d5fe2d887 | p@chr19:36400209..36400286, - |
6.69e-96 | FFCP PHASE2:Hg19::chr19:36400209..36400286,-#_5f69e00e7234b78e5e9ebe0d5fe2d887 | p@chr19:36400209..36400286, - |
7.75e-96 | FFCP PHASE1:Hg19::chr11:70161074..70161080,-#_09bd364f043110f684231d60a998ab0d | p@chr11:70161074..70161080, - |
7.75e-96 | FFCP PHASE2:Hg19::chr11:70161074..70161080,-#_09bd364f043110f684231d60a998ab0d | p@chr11:70161074..70161080, - |
7.57e-95 | FFCP PHASE1:Hg19::chr2:109204909..109204928,+#_01f29621db13d456c9252acc85d0f38b | p3@LIMS1 |
7.57e-95 | FFCP PHASE2:Hg19::chr2:109204909..109204928,+#_01f29621db13d456c9252acc85d0f38b | p3@LIMS1 |
1.23e-94 | FFCP PHASE1:Hg19::chr6:36665587..36665612,+#_ab43022fabb6f03e773b4abb2cc11756 | p1@uc010jwl.1 |
1.23e-94 | FFCP PHASE2:Hg19::chr6:36665587..36665612,+#_ab43022fabb6f03e773b4abb2cc11756 | p1@uc010jwl.1 |
4.83e-94 | FFCP PHASE2:Hg19::chr22:46998103..46998127,-#_17e73d8063eb5719e4aa570b6da4a18a | p@chr22:46998103..46998127, - |
4.83e-94 | FFCP PHASE1:Hg19::chr22:46998103..46998127,-#_17e73d8063eb5719e4aa570b6da4a18a | p@chr22:46998103..46998127, - |
6.81e-94 | FFCP PHASE1:Hg19::chr5:57787254..57787271,+#_60fd978dcd489dfbdfcbb92e218e8be0 | p2@GAPT |
6.81e-94 | FFCP PHASE2:Hg19::chr5:57787254..57787271,+#_60fd978dcd489dfbdfcbb92e218e8be0 | p2@GAPT |
2.22e-93 | FFCP PHASE1:Hg19::chr6:31583632..31583651,+#_6edf4c530b0086c3889ee811d9633579 | p5@AIF1 |
2.22e-93 | FFCP PHASE2:Hg19::chr6:31583632..31583651,+#_6edf4c530b0086c3889ee811d9633579 | p5@AIF1 |
6.0e-93 | FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_acab667d8d35b062f5aae26349ca6790 | p@chr16:50313426..50313459, + |
6.0e-93 | FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_acab667d8d35b062f5aae26349ca6790 | p@chr16:50313426..50313459, + |
7.03e-93 | FFCP PHASE2:Hg19::chr11:47399996..47400014,-#_9a74a9f6e7503bfd622dc71a0f933f88 | p4@SPI1 |
7.03e-93 | FFCP PHASE1:Hg19::chr11:47399996..47400014,-#_9a74a9f6e7503bfd622dc71a0f933f88 | p4@SPI1 |
9.92e-93 | FFCP PHASE2:Hg19::chr17:4642716..4642727,-#_adcaffde615768a14ae916ebf84eb13e | p7@CXCL16 |
9.92e-93 | FFCP PHASE1:Hg19::chr17:4642716..4642727,-#_adcaffde615768a14ae916ebf84eb13e | p7@CXCL16 |
1.41e-92 | FFCP PHASE1:Hg19::chr3:98482159..98482172,+#_5a48fd1b96186f573e78a64cbf2260a6 | p5@ST3GAL6 |
1.41e-92 | FFCP PHASE2:Hg19::chr3:98482159..98482172,+#_5a48fd1b96186f573e78a64cbf2260a6 | p5@ST3GAL6 |
1.63e-92 | FFCP PHASE1:Hg19::chr6:137105206..137105220,+#_445b911af367a06e54a0ea9c18640bc8 | p@chr6:137105206..137105220, + |
1.63e-92 | FFCP PHASE2:Hg19::chr6:137105206..137105220,+#_445b911af367a06e54a0ea9c18640bc8 | p@chr6:137105206..137105220, + |
2.56e-92 | FFCP PHASE1:Hg19::chr13:108922478..108922493,+#_c22036553d2e987d5c845de6fdb97e21 | p5@TNFSF13B |
2.56e-92 | FFCP PHASE2:Hg19::chr13:108922478..108922493,+#_c22036553d2e987d5c845de6fdb97e21 | p5@TNFSF13B |
6.37e-92 | FFCP PHASE1:Hg19::chr22:37257098..37257115,+#_a04cf2f16ee8c6424888d8114bd69e10 | p3@NCF4 |
6.37e-92 | FFCP PHASE2:Hg19::chr22:37257098..37257115,+#_a04cf2f16ee8c6424888d8114bd69e10 | p3@NCF4 |
7.64e-92 | FFCP PHASE2:Hg19::chr19:36398154..36398173,-#_7cc212730177e42767d6078f8a9ebf7f | p@chr19:36398154..36398173, - |
7.64e-92 | FFCP PHASE1:Hg19::chr19:36398154..36398173,-#_7cc212730177e42767d6078f8a9ebf7f | p@chr19:36398154..36398173, - |
1.22e-91 | FFCP PHASE2:Hg19::chr7:2832730..2832791,+#_bdb46e7965a22e8bc803a201c136b8eb | p@chr7:2832730..2832791, + |
1.22e-91 | FFCP PHASE1:Hg19::chr7:2832730..2832791,+#_bdb46e7965a22e8bc803a201c136b8eb | p@chr7:2832730..2832791, + |
2.01e-91 | FFCP PHASE1:Hg19::chr17:9923211..9923249,-#_d5a83f6143d1c7610e80e05720b0702e | p10@GAS7 |
2.01e-91 | FFCP PHASE2:Hg19::chr17:9923211..9923249,-#_d5a83f6143d1c7610e80e05720b0702e | p10@GAS7 |
4.57e-91 | FFCP PHASE2:Hg19::chr5:176936817..176936841,-#_ac6f80f530c907aaa30f6c7b67b5a8a6 | p2@DOK3 |
4.57e-91 | FFCP PHASE1:Hg19::chr5:176936817..176936841,-#_ac6f80f530c907aaa30f6c7b67b5a8a6 | p2@DOK3 |
1.8e-90 | FFCP PHASE2:Hg19::chr22:37257002..37257013,+#_9ae36270f4b86597ad56e391191dbffe | p4@NCF4 |
1.8e-90 | FFCP PHASE1:Hg19::chr22:37257002..37257013,+#_9ae36270f4b86597ad56e391191dbffe | p4@NCF4 |
2.43e-90 | FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_e644ed8b8bb2e64b7671b42c9f9f2da0 | p@chr19:18286116..18286156, + |
2.43e-90 | FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_e644ed8b8bb2e64b7671b42c9f9f2da0 | p@chr19:18286116..18286156, + |
3.13e-90 | FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_d9d2e0cc60c9099a21afecf376496bdb | p@chr1:161188661..161188679, + |
3.13e-90 | FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_d9d2e0cc60c9099a21afecf376496bdb | p@chr1:161188661..161188679, + |
9.35e-90 | FFCP PHASE2:Hg19::chr6:31554766..31554777,+#_544abaa23d1366efe0ba961eb220cc3e | p8@LST1 |
9.35e-90 | FFCP PHASE1:Hg19::chr6:31554766..31554777,+#_544abaa23d1366efe0ba961eb220cc3e | p8@LST1 |
9.81e-90 | FFCP PHASE2:Hg19::chr17:6916789..6916808,+#_7f278895f1a080695a29d96acd113734 | p10@C17orf49 |
9.81e-90 | FFCP PHASE1:Hg19::chr17:6916789..6916808,+#_7f278895f1a080695a29d96acd113734 | p10@C17orf49 |
1.04e-89 | FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_88de00a7c7160664b426a4ddde557525 | p@chr14:103587759..103587770, + |
1.04e-89 | FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_88de00a7c7160664b426a4ddde557525 | p@chr14:103587759..103587770, + |
2.62e-89 | FFCP PHASE2:Hg19::chr19:51714319..51714374,+#_b81fb03bcfc29a6ca3eb164803d56da0 | p@chr19:51714319..51714374, + |
2.62e-89 | FFCP PHASE1:Hg19::chr19:51714319..51714374,+#_b81fb03bcfc29a6ca3eb164803d56da0 | p@chr19:51714319..51714374, + |
4.84e-89 | FFCP PHASE1:Hg19::chr6:137105237..137105263,+#_2e50278dac9e2fd398f2c310fcb0f0c1 | p@chr6:137105237..137105263, + |
4.84e-89 | FFCP PHASE2:Hg19::chr6:137105237..137105263,+#_2e50278dac9e2fd398f2c310fcb0f0c1 | p@chr6:137105237..137105263, + |
4.9e-89 | FFCP PHASE2:Hg19::chr5:176936844..176936870,-#_50304a477484d7c24cb15a4936961021 | p3@DOK3 |
4.9e-89 | FFCP PHASE1:Hg19::chr5:176936844..176936870,-#_50304a477484d7c24cb15a4936961021 | p3@DOK3 |
7.3e-89 | FFCP PHASE2:Hg19::chr22:32034409..32034470,-#_f272f3c3fe91808a8f17b24ca7d49c1b | p4@PISD |
7.3e-89 | FFCP PHASE1:Hg19::chr22:32034409..32034470,-#_f272f3c3fe91808a8f17b24ca7d49c1b | p4@PISD |
8.29e-89 | FFCP PHASE2:Hg19::chr1:161039459..161039478,-#_cb0ede32e80b6b11034623baa28e848a | p4@ARHGAP30 |
8.29e-89 | FFCP PHASE1:Hg19::chr1:161039459..161039478,-#_cb0ede32e80b6b11034623baa28e848a | p4@ARHGAP30 |
9.58e-89 | FFCP PHASE2:Hg19::chr1:161475228..161475239,+#_2205da984eb2fbd99719d400bdd0089e | p3@FCGR2A |
9.58e-89 | FFCP PHASE1:Hg19::chr1:161475228..161475239,+#_2205da984eb2fbd99719d400bdd0089e | p3@FCGR2A |
1.26e-88 | FFCP PHASE2:Hg19::chr18:5466317..5466374,-#_33f32bd892b6d028cbeb5b1d0ebcfe54 | p@chr18:5466317..5466374, - |
1.26e-88 | FFCP PHASE1:Hg19::chr18:5466317..5466374,-#_33f32bd892b6d028cbeb5b1d0ebcfe54 | p@chr18:5466317..5466374, - |
1.34e-88 | FFCP PHASE1:Hg19::chr16:8738211..8738249,+#_91e43ad49b629eb3a73eaa907b50fa8c | p@chr16:8738211..8738249, + |
1.34e-88 | FFCP PHASE2:Hg19::chr16:8738211..8738249,+#_91e43ad49b629eb3a73eaa907b50fa8c | p@chr16:8738211..8738249, + |
2.3e-88 | FFCP PHASE1:Hg19::chr19:18285955..18285972,+#_ae21dfda9a697b32b98b1c37c5e881cb | p@chr19:18285955..18285972, + |
2.3e-88 | FFCP PHASE2:Hg19::chr19:18285955..18285972,+#_ae21dfda9a697b32b98b1c37c5e881cb | p@chr19:18285955..18285972, + |
3.13e-88 | FFCP PHASE2:Hg19::chr1:28211791..28211853,+#_026bccf37f14d5f0ef2bad2f30f82608 | p@chr1:28211791..28211853, + |
3.13e-88 | FFCP PHASE1:Hg19::chr1:28211791..28211853,+#_026bccf37f14d5f0ef2bad2f30f82608 | p@chr1:28211791..28211853, + |