CL:0000785: Difference between revisions
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|located_in= | |located_in= | ||
|name=mature B cell | |name=mature B cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:36, 12 September 2014
| Name: | mature B cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A B cell that is mature, having left the bone marrow. Initially, these cells are IgM-positive and IgD-positive, and they can be activated by antigen." [GOC:add, ISBN:0781735149] |
| Synonyms: |
"mature B lymphocyte" EXACT [] "mature B-cell" EXACT [] "mature B-lymphocyte" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000236(B cell) |
|---|---|
| disjoint_from: | CL:0000816(immature B cell),CL:0000817(precursor B cell),CL:0000818(transitional stage B cell) |
| develops_from: | CL:0000818(transitional stage B cell) |
Children
| is a: | CL:0000819 (B-1 B cell),CL:0000980 (plasmablast) |
|---|---|
| develops from: | CL:0000980 (plasmablast) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)
Mouse (Mus musculus)
- 10631-108I1 (diffuse large B-cell lymphoma cell line:CTB-1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000785 (mature B cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
