CL:0000792: Difference between revisions
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|name=CD4-positive, CD25-positive, alpha-beta regulatory T cell | |name=CD4-positive, CD25-positive, alpha-beta regulatory T cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:37, 12 September 2014
| Name: | CD4-positive, CD25-positive, alpha-beta regulatory T cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A CD4-positive, CD25-positive, alpha-beta T cell that regulates overall immune responses as well as the responses of other T cell subsets through direct cell-cell contact and cytokine release." [GOC:add, GOC:tfm, ISBN:0781735149, PMID:19464985] | ||
| Xrefs: |
| ||
| Synonyms: |
"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte" EXACT [] "CD4-positive, CD25-positive, alpha-beta regulatory T-cell" EXACT [] "CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte" EXACT [] "suppressor T cell" BROAD [] "suppressor T lymphocyte" BROAD [] "suppressor T-cell" BROAD [] "suppressor T-lymphocyte" BROAD [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000624(CD4-positive, alpha-beta T cell),CL:0000815(regulatory T cell) |
|---|
Children
| is a: | CL:0002677 (naive regulatory T cell),CL:0002678 (memory regulatory T cell) |
|---|---|
| derives from: | FF:0011454 (CD4-positiveCD25-positive regulatory T cells (C57BL_6J) sample),FF:0011455 (CD4-positiveCD25-positive regulatory T cells (Balb_cAJcl) sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
- 11814-124E5 (CD4+CD25+ regulatory T cells, pool1 (C57BL_6J))
- 11818-124E9 (CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl))
- 11945-126B1 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL 6J))
Mouse (Mus musculus)
- 11780-124A7 (CD4+CD25+CD45RA+ naive regulatory T cells, donor1)
- 11782-124A9 (CD4+CD25+CD45RA- memory regulatory T cells, donor1)
- 11814-124E5 (CD4+CD25+ regulatory T cells, pool1 (C57BL_6J))
- 11818-124E9 (CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl))
- 11945-126B1 (CD4+CD25+ regulatory T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL 6J))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000792 (CD4-positive, CD25-positive, alpha-beta regulatory T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.61e-131 | FFCP PHASE1:Hg19::chr1:113160702..113160706,-#_7eb629238f20182fa932493119f8e655 | p21@ST7L |
| 4.61e-131 | FFCP PHASE2:Hg19::chr1:113160702..113160706,-#_7eb629238f20182fa932493119f8e655 | p21@ST7L |
| 5.68e-99 | FFCP PHASE2:Hg19::chr11:111410267..111410269,+#_4b57093f8beed8fd80c81e4dee882aea | p@chr11:111410267..111410269, + |
| 5.68e-99 | FFCP PHASE1:Hg19::chr11:111410267..111410269,+#_4b57093f8beed8fd80c81e4dee882aea | p@chr11:111410267..111410269, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:73015629..73015632,+#_eb9aa43f6eeb17bec4109741d89cab77 | p@chr3:73015629..73015632, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:73015629..73015632,+#_eb9aa43f6eeb17bec4109741d89cab77 | p@chr3:73015629..73015632, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:32306609..32306610,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr2:32306609..32306610, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:114668438..114668451,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr12:114668438..114668451, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:132631174..132631179,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr7:132631174..132631179, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:14706346..14706355,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr9:14706346..14706355, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:69595515..69595518,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:69595515..69595518, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:162743278..162743283,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:162743278..162743283, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:43627067..43627074,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr13:43627067..43627074, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:15821719..15821726,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr12:15821719..15821726, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:151490543..151490552,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p6@Tnfrsf25 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:114668438..114668451,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr12:114668438..114668451, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:69148201..69148218,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr9:69148201..69148218, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:59354543..59354548,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr15:59354543..59354548, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:14707496..14707511,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr9:14707496..14707511, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:60970179..60970192,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60970179..60970192, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:12160236..12160239,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr15:12160236..12160239, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:4397528..4397535,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr11:4397528..4397535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:109240261..109240265,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr12:109240261..109240265, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35164610..35164618,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p5@Ng23 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:60944156..60944166,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60944156..60944166, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:108370128..108370136,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr12:108370128..108370136, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:101090598..101090601,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr3:101090598..101090601, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:101090598..101090601,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr3:101090598..101090601, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:14812338..14812345,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr9:14812338..14812345, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:7157611..7157617,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p4@Foxp3 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:69729950..69729959,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:69729950..69729959, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:15821719..15821726,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr12:15821719..15821726, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:74526430..74526446,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr8:74526430..74526446, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:151490501..151490511,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p5@Tnfrsf25 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:22022863..22022865,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr10:22022863..22022865, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:150229693..150229735,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr5:150229693..150229735, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:7161574..7161577,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chrX:7161574..7161577, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:74526480..74526487,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr8:74526480..74526487, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:102843557..102843585,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr4:102843557..102843585, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:59357447..59357449,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr15:59357447..59357449, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:60967956..60967966,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60967956..60967966, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113079356..113079360,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr13:113079356..113079360, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:78812885..78812894,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr2:78812885..78812894, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:29566022..29566044,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr17:29566022..29566044, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:155396655..155396659,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr4:155396655..155396659, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:49536818..49536841,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr6:49536818..49536841, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:60967565..60967590,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60967565..60967590, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:155570551..155570558,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:155570551..155570558, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:139885951..139885958,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr2:139885951..139885958, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:7147964..7147979,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chrX:7147964..7147979, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:106741792..106741797,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr6:106741792..106741797, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:7170204..7170205,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chrX:7170204..7170205, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:12884884..12884887,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr17:12884884..12884887, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:106741792..106741797,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr6:106741792..106741797, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:60770897..60770901,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60770897..60770901, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:22022863..22022865,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr10:22022863..22022865, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:7172178..7172190,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chrX:7172178..7172190, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:60770897..60770901,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60770897..60770901, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:69729718..69729723,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:69729718..69729723, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:89837454..89837462,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr16:89837454..89837462, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:36770181..36770184,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr16:36770181..36770184, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:49536818..49536841,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr6:49536818..49536841, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:7157611..7157617,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p4@Foxp3 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:93597971..93597979,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr8:93597971..93597979, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:7148320..7148329,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chrX:7148320..7148329, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:69727659..69727696,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:69727659..69727696, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:59354543..59354548,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr15:59354543..59354548, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:13699290..13699296,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr9:13699290..13699296, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:60967565..60967590,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60967565..60967590, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:59356135..59356143,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr15:59356135..59356143, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:58784974..58784979,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr10:58784974..58784979, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:123843234..123843237,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr9:123843234..123843237, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:60970510..60970516,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60970510..60970516, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:155570551..155570558,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:155570551..155570558, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:4397552..4397557,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr11:4397552..4397557, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:5504747..5504756,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr15:5504747..5504756, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:7172178..7172190,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chrX:7172178..7172190, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:60944205..60944230,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:60944205..60944230, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:12884884..12884887,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr17:12884884..12884887, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:4397528..4397535,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr11:4397528..4397535, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:108729732..108729745,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr7:108729732..108729745, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:46831423..46831426,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr13:46831423..46831426, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:12807573..12807582,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr17:12807573..12807582, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35164593..35164602,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p6@Ng23 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:101876628..101876637,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr14:101876628..101876637, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:93597971..93597979,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr8:93597971..93597979, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:151490543..151490552,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p6@Tnfrsf25 |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:7170204..7170205,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chrX:7170204..7170205, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:74526522..74526532,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr8:74526522..74526532, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:105413537..105413540,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr13:105413537..105413540, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:121283156..121283178,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr7:121283156..121283178, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:155400229..155400241,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p3@Tnfrsf18 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:14708334..14708341,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p11@Folr4 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:18908457..18908466,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr10:18908457..18908466, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:14662914..14662922,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr9:14662914..14662922, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:26688385..26688421,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr17:26688385..26688421, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:69148201..69148218,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr9:69148201..69148218, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:69595515..69595518,-#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr1:69595515..69595518, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:111613723..111613727,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr12:111613723..111613727, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:108729732..108729745,+#_9c02a21c1f6f8f1d9c8d1adc11a8b2dd | p@chr7:108729732..108729745, + |
