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{{CL
{{CL
|id=CL:0002009
|alt_id=
|name=macrophage dendritic cell progenitor
|namespace=cell;;efo
|def="A progenitor cell that can give rise to plasmacytoid and myeloid dendritic cells, and to monocytes and macrophages." [GOC:tfm, PMID:19273628]
|xref=
|is_a=CL:0002032
|synonym="MDP" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-01-19T02:51:58Z
|def="A progenitor cell that can give rise to plasmacytoid and myeloid dendritic cells, and to monocytes and macrophages." [GOC:tfm, PMID:19273628]
|subset=
|derives_from=
|derives_from=
|develops_from=CL:0000557
|develops_from=CL:0000557
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002009
|is_a=CL:0000763 ;;CL:0002032
|is_obsolete=
|located_in=
|located_in=
|name=macrophage dendritic cell progenitor
|namespace=FANTOM
|obo_creation_date=2010-01-19T02:51:58Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="MDP" EXACT []
|union_of=
|xref=
}}
}}

Latest revision as of 16:39, 12 September 2014

Name:macrophage dendritic cell progenitor
Namespace:FANTOM
Definition:"A progenitor cell that can give rise to plasmacytoid and myeloid dendritic cells, and to monocytes and macrophages." [GOC:tfm, PMID:19273628]
Synonyms: "MDP" EXACT []
Created by:tmeehan
Creation date:2010-01-19T02:51:58Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000763(myeloid cell),CL:0002032(hematopoietic oligopotent progenitor cell)
develops_from:CL:0000557(granulocyte monocyte progenitor cell)



Children


disjoint from:CL:0000050 (megakaryocyte-erythroid progenitor cell)
develops from:CL:0000040 (monoblast),CL:0001029 (common dendritic progenitor)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002009 (macrophage dendritic cell progenitor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.35e-142FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_f7d5dcd08d5c23cf8c8e2182c56fefdep@chr7:77050554..77050601, +
1.35e-142FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_f7d5dcd08d5c23cf8c8e2182c56fefdep@chr7:77050554..77050601, +
6.53e-140FFCP PHASE1:Hg19::chr19:18288651..18288682,+#_c9904741db605b8dd205146bbd92d920p5@IFI30
6.53e-140FFCP PHASE2:Hg19::chr19:18288651..18288682,+#_c9904741db605b8dd205146bbd92d920p5@IFI30
3.56e-135FFCP PHASE1:Hg19::chr5:180242646..180242657,-#_ade009d597ce5ccce865d5832950982dp15@MGAT1
3.56e-135FFCP PHASE2:Hg19::chr5:180242646..180242657,-#_ade009d597ce5ccce865d5832950982dp15@MGAT1
4.08e-135FFCP PHASE1:Hg19::chr19:18288828..18288861,+#_6eeea7858c7fd889ff90618f62f88badp7@IFI30
4.08e-135FFCP PHASE2:Hg19::chr19:18288828..18288861,+#_6eeea7858c7fd889ff90618f62f88badp7@IFI30
1.01e-134FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_44a58f78c1e606443274fcd78afdf6d7p@chr1:161188661..161188679, +
1.01e-134FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_44a58f78c1e606443274fcd78afdf6d7p@chr1:161188661..161188679, +
3.77e-133FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_17d34b1918a3bf41f85514e25b26996bp@chr19:18286116..18286156, +
3.77e-133FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_17d34b1918a3bf41f85514e25b26996bp@chr19:18286116..18286156, +
3.39e-131FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_0406647b79113bcc15c5172e8bad8e39p1@CYP1B1-AS1
3.39e-131FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_0406647b79113bcc15c5172e8bad8e39p1@CYP1B1-AS1
8.03e-131FFCP PHASE1:Hg19::chr4:159727272..159727307,+#_a47f0ae383e0aaf34ba67af383321427p7@FNIP2
8.03e-131FFCP PHASE2:Hg19::chr4:159727272..159727307,+#_a47f0ae383e0aaf34ba67af383321427p7@FNIP2
3.02e-130FFCP PHASE1:Hg19::chr4:185314125..185314143,-#_2dc95f997b0312e38c36f27194cf62e6p@chr4:185314125..185314143, -
3.02e-130FFCP PHASE2:Hg19::chr4:185314125..185314143,-#_2dc95f997b0312e38c36f27194cf62e6p@chr4:185314125..185314143, -
1.75e-129FFCP PHASE2:Hg19::chr3:149531627..149531651,+#_ddb3c614863f7ad8b2bbc86cb4dff7eep7@RNF13
1.75e-129FFCP PHASE1:Hg19::chr3:149531627..149531651,+#_ddb3c614863f7ad8b2bbc86cb4dff7eep7@RNF13
3.48e-129FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_9d6fcb83c782e69070845ddd2d07e0c8p@chr2:119726719..119726744, +
3.48e-129FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_9d6fcb83c782e69070845ddd2d07e0c8p@chr2:119726719..119726744, +
3.71e-129FFCP PHASE2:Hg19::chr1:161187824..161187847,+#_93e6c522f4177a1f23ca03c4d04a748ap@chr1:161187824..161187847, +
3.71e-129FFCP PHASE1:Hg19::chr1:161187824..161187847,+#_93e6c522f4177a1f23ca03c4d04a748ap@chr1:161187824..161187847, +
9.26e-129FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_af1f4131daaa68a55bf77f38f8e02048p@chr17:7482481..7482508, -
9.26e-129FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_af1f4131daaa68a55bf77f38f8e02048p@chr17:7482481..7482508, -
2.97e-128FFCP PHASE1:Hg19::chr17:40168698..40168726,-#_ef8fb4e613d769d1610fa6a9c492b707p1@AK126179
2.97e-128FFCP PHASE2:Hg19::chr17:40168698..40168726,-#_ef8fb4e613d769d1610fa6a9c492b707p1@AK126179
4.18e-128FFCP PHASE2:Hg19::chr5:131280548..131280574,-#_f3275dfed20eb1443111ba082112aca5p1@ENST00000425320
4.18e-128FFCP PHASE1:Hg19::chr5:131280548..131280574,-#_f3275dfed20eb1443111ba082112aca5p1@ENST00000425320
4.86e-128FFCP PHASE1:Hg19::chr4:185314151..185314178,-#_b40dac2f7e78dabc3567c5c8493980abp@chr4:185314151..185314178, -
4.86e-128FFCP PHASE2:Hg19::chr4:185314151..185314178,-#_b40dac2f7e78dabc3567c5c8493980abp@chr4:185314151..185314178, -
6.26e-128FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_4ee2401ba6697dc46f697514c8bc7481p@chr2:145429606..145429658, +
6.26e-128FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_4ee2401ba6697dc46f697514c8bc7481p@chr2:145429606..145429658, +
1.6e-127FFCP PHASE1:Hg19::chrX:153286067..153286101,-#_4d04eda71b478f2f44a91a44ab5270cdp@chrX:153286067..153286101, -
1.6e-127FFCP PHASE2:Hg19::chrX:153286067..153286101,-#_4d04eda71b478f2f44a91a44ab5270cdp@chrX:153286067..153286101, -
3.87e-127FFCP PHASE2:Hg19::chr19:18288064..18288080,+#_1f67bfaca9cd94d1f1862105a5f9a1b8p@chr19:18288064..18288080, +
3.87e-127FFCP PHASE1:Hg19::chr19:18288064..18288080,+#_1f67bfaca9cd94d1f1862105a5f9a1b8p@chr19:18288064..18288080, +
9.86e-127FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_d18445c90f50b445d963f5eccc99548fp8@CTSS
9.86e-127FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_d18445c90f50b445d963f5eccc99548fp8@CTSS
1.09e-126FFCP PHASE2:Hg19::chrX:37664331..37664352,+#_a94e686945fcd2b642668b57045800b1p@chrX:37664331..37664352, +
1.09e-126FFCP PHASE1:Hg19::chrX:37664331..37664352,+#_a94e686945fcd2b642668b57045800b1p@chrX:37664331..37664352, +
1.4e-126FFCP PHASE1:Hg19::chr4:185314188..185314207,-#_3083ecb18ac002c978e427cbfea6ee97p@chr4:185314188..185314207, -
1.4e-126FFCP PHASE2:Hg19::chr4:185314188..185314207,-#_3083ecb18ac002c978e427cbfea6ee97p@chr4:185314188..185314207, -
2.25e-126FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_6653183b4b27a9ec1184366c67365e27p@chr15:65174546..65174583, -
2.25e-126FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_6653183b4b27a9ec1184366c67365e27p@chr15:65174546..65174583, -
2.55e-126FFCP PHASE1:Hg19::chr19:18285955..18285972,+#_2a07e37beb530018033977cbac7fa94cp@chr19:18285955..18285972, +
2.55e-126FFCP PHASE2:Hg19::chr19:18285955..18285972,+#_2a07e37beb530018033977cbac7fa94cp@chr19:18285955..18285972, +
3.72e-126FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_f9c49898014276b87024f58c16ff1221p@chr16:50313426..50313459, +
3.72e-126FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_f9c49898014276b87024f58c16ff1221p@chr16:50313426..50313459, +
1.34e-125FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_c275673e267d440d9f1a6163dffd6f8bp@chr1:161188746..161188758, +
1.34e-125FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_c275673e267d440d9f1a6163dffd6f8bp@chr1:161188746..161188758, +
2.52e-125FFCP PHASE1:Hg19::chr19:18283959..18283993,+#_3cf17cb88e16d39a86ce5a24c941e06bp@chr19:18283959..18283993, +
2.52e-125FFCP PHASE2:Hg19::chr19:18283959..18283993,+#_3cf17cb88e16d39a86ce5a24c941e06bp@chr19:18283959..18283993, +
7.64e-125FFCP PHASE2:Hg19::chr20:1517991..1518011,-#_c1751217559d2252a49f4ee4ff5a7c54p@chr20:1517991..1518011, -
7.64e-125FFCP PHASE1:Hg19::chr20:1517991..1518011,-#_c1751217559d2252a49f4ee4ff5a7c54p@chr20:1517991..1518011, -
1.41e-124FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_bf467f6c34e92c451bd5577133ea55dcp7@EMILIN2
1.41e-124FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_bf467f6c34e92c451bd5577133ea55dcp7@EMILIN2
4.4e-124FFCP PHASE2:Hg19::chr19:18288914..18288931,-#_d6461978836cf9bd51ad669ea341ebc8p5@CU676849, p5@CU689079
4.4e-124FFCP PHASE1:Hg19::chr19:18288914..18288931,-#_d6461978836cf9bd51ad669ea341ebc8p5@CU676849, p5@CU689079
4.95e-124FFCP PHASE1:Hg19::chr19:18288514..18288554,+#_246726d0b6c11efa60f1bf0273a3acc6p6@IFI30
4.95e-124FFCP PHASE2:Hg19::chr19:18288514..18288554,+#_246726d0b6c11efa60f1bf0273a3acc6p6@IFI30
6.69e-124FFCP PHASE1:Hg19::chr5:180242576..180242585,-#_825886e89f77cdbaf8696cfefc63fa1cp12@MGAT1
6.69e-124FFCP PHASE2:Hg19::chr5:180242576..180242585,-#_825886e89f77cdbaf8696cfefc63fa1cp12@MGAT1
2.32e-123FFCP PHASE1:Hg19::chr8:53373491..53373506,-#_889e0b086d9b9a5ab965fce77674c176p4@ST18
2.32e-123FFCP PHASE2:Hg19::chr8:53373491..53373506,-#_889e0b086d9b9a5ab965fce77674c176p4@ST18
6.87e-123FFCP PHASE1:Hg19::chr17:7483714..7483726,+#_89126a079e62addc22ad89ebac9cfed4p@chr17:7483714..7483726, +
6.87e-123FFCP PHASE2:Hg19::chr17:7483714..7483726,+#_89126a079e62addc22ad89ebac9cfed4p@chr17:7483714..7483726, +
9.55e-123FFCP PHASE2:Hg19::chr10:73648356..73648408,-#_f8542a9d49690953dfe259f31d01a55bp@chr10:73648356..73648408, -
9.55e-123FFCP PHASE1:Hg19::chr10:73648356..73648408,-#_f8542a9d49690953dfe259f31d01a55bp@chr10:73648356..73648408, -
3.76e-122FFCP PHASE1:Hg19::chr22:46998103..46998127,-#_f399fa0c6e6d5586e0496e68e0289e58p@chr22:46998103..46998127, -
3.76e-122FFCP PHASE2:Hg19::chr22:46998103..46998127,-#_f399fa0c6e6d5586e0496e68e0289e58p@chr22:46998103..46998127, -
8.38e-122FFCP PHASE2:Hg19::chr19:51625924..51625942,+#_b920ed362c95983dedd12694c1553649p@chr19:51625924..51625942, +
8.38e-122FFCP PHASE1:Hg19::chr19:51625924..51625942,+#_b920ed362c95983dedd12694c1553649p@chr19:51625924..51625942, +
1.56e-121FFCP PHASE1:Hg19::chr4:185266972..185267007,+#_51a802fb3c5cf00c3986e79f597c2198p@chr4:185266972..185267007, +
1.56e-121FFCP PHASE2:Hg19::chr4:185266972..185267007,+#_51a802fb3c5cf00c3986e79f597c2198p@chr4:185266972..185267007, +
2.01e-121FFCP PHASE1:Hg19::chr11:122735321..122735348,+#_93fae4b7b6d9da90f6b08f7ad4279380p1@CRTAM
2.01e-121FFCP PHASE2:Hg19::chr11:122735321..122735348,+#_93fae4b7b6d9da90f6b08f7ad4279380p1@CRTAM
5.1e-121FFCP PHASE2:Hg19::chr1:150705526..150705571,-#_061dfcd8b7b4c512e2986a9081842b55p@chr1:150705526..150705571, -
5.1e-121FFCP PHASE1:Hg19::chr1:150705526..150705571,-#_061dfcd8b7b4c512e2986a9081842b55p@chr1:150705526..150705571, -
5.47e-121FFCP PHASE2:Hg19::chr5:156534012..156534066,-#_5fb35716be73181af4157c36a99123e6p10@HAVCR2
5.47e-121FFCP PHASE1:Hg19::chr5:156534012..156534066,-#_5fb35716be73181af4157c36a99123e6p10@HAVCR2
8.48e-121FFCP PHASE2:Hg19::chrX:152086449..152086473,+#_f56a9ada7c11f9697f4fdea8eabff196p4@ZNF185
8.48e-121FFCP PHASE1:Hg19::chrX:152086449..152086473,+#_f56a9ada7c11f9697f4fdea8eabff196p4@ZNF185
1.46e-120FFCP PHASE1:Hg19::chr15:59469817..59469836,+#_ec3877e9d97ace94179ce3a9a442a741p@chr15:59469817..59469836, +
1.46e-120FFCP PHASE2:Hg19::chr15:59469817..59469836,+#_ec3877e9d97ace94179ce3a9a442a741p@chr15:59469817..59469836, +
1.66e-120FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_4d3bc93f5ecadf2154e2515df8194c20p2@ZEB2-AS1
1.66e-120FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_4d3bc93f5ecadf2154e2515df8194c20p2@ZEB2-AS1
2.43e-120FFCP PHASE1:Hg19::chr10:134823232..134823267,+#_2d16097db0fc8f55a2bc92dbd19efa41p@chr10:134823232..134823267, +
2.43e-120FFCP PHASE2:Hg19::chr10:134823232..134823267,+#_2d16097db0fc8f55a2bc92dbd19efa41p@chr10:134823232..134823267, +
3.11e-120FFCP PHASE2:Hg19::chr12:10270166..10270201,-#_92447d59710c6b42f3f14beb28ecca8fp@chr12:10270166..10270201, -
3.11e-120FFCP PHASE1:Hg19::chr12:10270166..10270201,-#_92447d59710c6b42f3f14beb28ecca8fp@chr12:10270166..10270201, -
3.27e-120FFCP PHASE2:Hg19::chr20:1517945..1517963,-#_4b2c66e22d3b0f714857fe0065c23012p@chr20:1517945..1517963, -
3.27e-120FFCP PHASE1:Hg19::chr20:1517945..1517963,-#_4b2c66e22d3b0f714857fe0065c23012p@chr20:1517945..1517963, -
3.33e-120FFCP PHASE1:Hg19::chr6:33037634..33037668,-#_822462182aee504cb593e87516a4fd84p@chr6:33037634..33037668, -
3.33e-120FFCP PHASE2:Hg19::chr6:33037634..33037668,-#_822462182aee504cb593e87516a4fd84p@chr6:33037634..33037668, -
3.47e-120FFCP PHASE2:Hg19::chr8:116588888..116588904,+#_9c953c194ab1da8d7588fad30744ff11p@chr8:116588888..116588904, +
3.47e-120FFCP PHASE1:Hg19::chr8:116588888..116588904,+#_9c953c194ab1da8d7588fad30744ff11p@chr8:116588888..116588904, +
5.16e-120FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_69abc87348df29dea9e643839653e107p@chr1:161188686..161188721, +
5.16e-120FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_69abc87348df29dea9e643839653e107p@chr1:161188686..161188721, +

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