CL:0002242: Difference between revisions
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|located_in= | |located_in= | ||
|name=nucleate cell | |name=nucleate cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-09-07T03:32:33Z | |obo_creation_date=2010-09-07T03:32:33Z | ||
|part_of= | |part_of= | ||
Latest revision as of 16:41, 12 September 2014
| Name: | nucleate cell | ||
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| Namespace: | FANTOM | ||
| Definition: | "A cell containing at least one nucleus." [GOC:tfm] | ||
| Xrefs: |
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| Created by: | tmeehan | ||
| Creation date: | 2010-09-07T03:32:33Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000003(native cell) |
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Children
| is a: | CL:0000226 (single nucleate cell),CL:0000228 (multinucleate cell),CL:0000542 (lymphocyte),CL:0000547 (proerythroblast),CL:0000765 (erythroblast),CL:0000835 (myeloblast),CL:0000836 (promyelocyte) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10427-106D4 (b cell line:RPMI1788)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)
- 10464-106H5 (acute lymphoblastic leukemia (T-ALL) cell line:Jurkat)
- 10467-106H8
- 10474-106I6 (myeloma cell line:PCM6)
- 10476-106I8 (Burkitt's lymphoma cell line:RAJI)
... further results Mouse (Mus musculus)
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10427-106D4 (b cell line:RPMI1788)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)
- 10464-106H5 (acute lymphoblastic leukemia (T-ALL) cell line:Jurkat)
- 10467-106H8
- 10474-106I6 (myeloma cell line:PCM6)
- 10476-106I8 (Burkitt's lymphoma cell line:RAJI)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002242 (nucleate cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
