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{{CL
{{CL
|id=CL:0002491
|alt_id=
|name=auditory epithelial cell
|namespace=cell
|def="A specialized cell involved in auditory sensory perception." [GOC:tfm]
|xref=
|is_a=CL:0000098
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-12-06T03:18:43Z
|def="A specialized cell involved in auditory sensory perception." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002491
|is_a=CL:0000098
|is_obsolete=
|located_in=
|located_in=
|name=auditory epithelial cell
|namespace=FANTOM
|obo_creation_date=2010-12-06T03:18:43Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:43, 12 September 2014

Name:auditory epithelial cell
Namespace:FANTOM
Definition:"A specialized cell involved in auditory sensory perception." [GOC:tfm]
Created by:tmeehan
Creation date:2010-12-06T03:18:43Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000098(sensory epithelial cell)



Children


is a:CL:0000202 (auditory hair cell),CL:0005014 (auditory epithelial support cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002491 (auditory epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_d8421a0cfd1b4c1125356250a3301f5bp2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_d8421a0cfd1b4c1125356250a3301f5bp4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_d8421a0cfd1b4c1125356250a3301f5bp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_d8421a0cfd1b4c1125356250a3301f5bp10@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_d8421a0cfd1b4c1125356250a3301f5bp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_d8421a0cfd1b4c1125356250a3301f5bp2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_d8421a0cfd1b4c1125356250a3301f5bp10@Sec11a
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_d8421a0cfd1b4c1125356250a3301f5bp7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_d8421a0cfd1b4c1125356250a3301f5bp3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_d8421a0cfd1b4c1125356250a3301f5bp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_d8421a0cfd1b4c1125356250a3301f5bp5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_d8421a0cfd1b4c1125356250a3301f5bp15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_d8421a0cfd1b4c1125356250a3301f5bp41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_d8421a0cfd1b4c1125356250a3301f5bp2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_d8421a0cfd1b4c1125356250a3301f5bp3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Otog
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_d8421a0cfd1b4c1125356250a3301f5bp2@Strc
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_d8421a0cfd1b4c1125356250a3301f5bp1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_d8421a0cfd1b4c1125356250a3301f5bp9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_d8421a0cfd1b4c1125356250a3301f5bp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr3:154459231..154459240, +
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_d8421a0cfd1b4c1125356250a3301f5bp3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_d8421a0cfd1b4c1125356250a3301f5bp4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_d8421a0cfd1b4c1125356250a3301f5bp7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_d8421a0cfd1b4c1125356250a3301f5bp9@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_d8421a0cfd1b4c1125356250a3301f5bp18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_d8421a0cfd1b4c1125356250a3301f5bp41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_d8421a0cfd1b4c1125356250a3301f5bp6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_d8421a0cfd1b4c1125356250a3301f5bp2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_d8421a0cfd1b4c1125356250a3301f5bp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_d8421a0cfd1b4c1125356250a3301f5bp@chr8:13414289..13414295, +

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