CL:0002549: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:0002549
|name=fibroblast of choroid plexus
|namespace=cell
|def="A fibroblast that is part of the choroid plexus." [GOC:tfm]
|xref=
|is_a=CL:0000057
|synony...") |
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|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="A fibroblast that is part of the choroid plexus." [GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|has_quality= | |has_quality= | ||
|id=CL:0002549 | |||
|is_a=CL:0000057 ;;CL:0002319 | |||
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|located_in= | |located_in= | ||
|name=fibroblast of choroid plexus | |||
|namespace=FANTOM | |||
|obo_creation_date=2011-02-28T05:01:39Z | |||
|part_of=UBERON:0001886 | |part_of=UBERON:0001886 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
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}} | }} |
Latest revision as of 16:44, 12 September 2014
Name: | fibroblast of choroid plexus |
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Namespace: | FANTOM |
Definition: | "A fibroblast that is part of the choroid plexus." [GOC:tfm] |
Created by: | tmeehan |
Creation date: | 2011-02-28T05:01:39Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000057(fibroblast),CL:0002319(neural cell) |
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part_of: | UBERON:0001886(choroid plexus) |
Children
derives from: | FF:0000060 (human fibroblast of choroid plexus sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11492-119E7 (Fibroblast - Choroid Plexus, donor1)
- 11572-120E6 (Fibroblast - Choroid Plexus, donor2)
- 11653-122E6 (Fibroblast - Choroid Plexus, donor3)
Mouse (Mus musculus)
- 11492-119E7 (Fibroblast - Choroid Plexus, donor1)
- 11572-120E6 (Fibroblast - Choroid Plexus, donor2)
- 11653-122E6 (Fibroblast - Choroid Plexus, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002549 (fibroblast of choroid plexus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data