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{{CL
{{CL
|id=CL:0002565
|alt_id=
|name=iris pigment epithelial cell
|namespace=cell
|def="A pigment cell located in the epithelium of the iris." [GOC:tfm]
|xref=
|is_a=CL:0000066;;CL:0000342
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-01T05:28:52Z
|def="A pigment cell located in the epithelium of the iris." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002565
|is_a=CL:0000066 ;;CL:0000342
|is_obsolete=
|located_in=
|located_in=
|name=iris pigment epithelial cell
|namespace=FANTOM
|obo_creation_date=2011-03-01T05:28:52Z
|part_of=UBERON:0002506
|part_of=UBERON:0002506
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:44, 12 September 2014

Name:iris pigment epithelial cell
Namespace:FANTOM
Definition:"A pigment cell located in the epithelium of the iris." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-01T05:28:52Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000066(epithelial cell),CL:0000342(pigment cell (sensu Vertebrata))
part_of:UBERON:0002506(iris epithelium)



Children


derives from:FF:0000081 (human iris pigment epithelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002565 (iris pigment epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.37e-99FFCP PHASE2:Hg19::chr15:71583868..71583874,-#_5c9bf62f997b4cbf4cb008915733bf87p@chr15:71583868..71583874, -
9.37e-99FFCP PHASE1:Hg19::chr15:71583868..71583874,-#_5c9bf62f997b4cbf4cb008915733bf87p@chr15:71583868..71583874, -
1.23e-66FFCP PHASE2:Hg19::chr5:78112479..78112482,+#_48b51241422de1684abf5ee25ea107b5p@chr5:78112479..78112482, +
1.23e-66FFCP PHASE1:Hg19::chr5:78112479..78112482,+#_48b51241422de1684abf5ee25ea107b5p@chr5:78112479..78112482, +
2.39e-66FFCP PHASE1:Hg19::chr15:74495062..74495063,-#_36b36e8904b264341482a6a78be3941bp13@STRA6
2.39e-66FFCP PHASE2:Hg19::chr15:74495062..74495063,-#_36b36e8904b264341482a6a78be3941bp13@STRA6
4.66e-66FFCP PHASE2:Hg19::chr22:50667406..50667412,+#_e7ebcfc96faed5fed7f6b54afdbf51e8p@chr22:50667406..50667412, +
4.66e-66FFCP PHASE1:Hg19::chr22:50667406..50667412,+#_e7ebcfc96faed5fed7f6b54afdbf51e8p@chr22:50667406..50667412, +
1.46e-50FFCP PHASE1:Hg19::chr8:53853688..53853698,-#_7645043fe34917f38236fef1d3aee74cp3@BC033145
1.46e-50FFCP PHASE2:Hg19::chr8:53853688..53853698,-#_7645043fe34917f38236fef1d3aee74cp3@BC033145
2.42e-50FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_67548a5580448eea05bee490b62b574dp@chr7:115723897..115723915, -
2.42e-50FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_67548a5580448eea05bee490b62b574dp@chr7:115723897..115723915, -
6.58e-50FFCP PHASE1:Hg19::chr14:100847969..100847980,+#_00c03527d925c8d615f4dee1d3310b99p6@WDR25
6.58e-50FFCP PHASE2:Hg19::chr14:100847969..100847980,+#_00c03527d925c8d615f4dee1d3310b99p6@WDR25
6.62e-41FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_37f6557b4bdfb09c609c8ce2673ef78fp@chr2:35680607..35680613, -
6.62e-41FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_37f6557b4bdfb09c609c8ce2673ef78fp@chr7:131803806..131803815, +
6.62e-41FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_37f6557b4bdfb09c609c8ce2673ef78fp@chr2:35680607..35680613, -
6.62e-41FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_37f6557b4bdfb09c609c8ce2673ef78fp@chr7:131803806..131803815, +
9.91e-41FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_b0494a298404930d7dfabb21d01d1986p@chr7:115723925..115723935, -
9.91e-41FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_b0494a298404930d7dfabb21d01d1986p@chrX:106198807..106198826, -
9.91e-41FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_b0494a298404930d7dfabb21d01d1986p@chr7:115723925..115723935, -
9.91e-41FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_b0494a298404930d7dfabb21d01d1986p@chrX:106198807..106198826, -
1.48e-40FFCP PHASE1:Hg19::chr5:34728676..34728679,+#_56ffc9fdd65a5eb25290cef93119d6e8p26@RAI14
1.48e-40FFCP PHASE2:Hg19::chr5:34728676..34728679,+#_56ffc9fdd65a5eb25290cef93119d6e8p26@RAI14
2.21e-40FFCP PHASE1:Hg19::chr15:41062022..41062028,+#_1a67970a3b27abf9ff24b046227a18bfp3@C15orf62
2.21e-40FFCP PHASE2:Hg19::chr15:41062022..41062028,+#_1a67970a3b27abf9ff24b046227a18bfp3@C15orf62
3.3e-40FFCP PHASE2:Hg19::chr1:94583454..94583465,-#_30f120b8c11cb2b0c80ffc1625d35361p@chr1:94583454..94583465, -
3.3e-40FFCP PHASE2:Hg19::chr16:80552480..80552487,-#_30f120b8c11cb2b0c80ffc1625d35361p@chr16:80552480..80552487, -
3.3e-40FFCP PHASE1:Hg19::chr3:98671855..98671858,+#_30f120b8c11cb2b0c80ffc1625d35361p@chr3:98671855..98671858, +
3.3e-40FFCP PHASE2:Hg19::chr3:98671855..98671858,+#_30f120b8c11cb2b0c80ffc1625d35361p@chr3:98671855..98671858, +
3.3e-40FFCP PHASE1:Hg19::chr1:94583454..94583465,-#_30f120b8c11cb2b0c80ffc1625d35361p@chr1:94583454..94583465, -
3.3e-40FFCP PHASE1:Hg19::chr4:88447806..88447810,+#_30f120b8c11cb2b0c80ffc1625d35361p@chr4:88447806..88447810, +
3.3e-40FFCP PHASE2:Hg19::chr4:88447806..88447810,+#_30f120b8c11cb2b0c80ffc1625d35361p@chr4:88447806..88447810, +
3.3e-40FFCP PHASE1:Hg19::chr16:80552480..80552487,-#_30f120b8c11cb2b0c80ffc1625d35361p@chr16:80552480..80552487, -
2.58e-34FFCP PHASE2:Hg19::chr11:31667372..31667383,-#_0d5ce5cdb930052b42ac7ef43cdfe559p@chr11:31667372..31667383, -
2.58e-34FFCP PHASE1:Hg19::chr3:98672197..98672201,+#_0d5ce5cdb930052b42ac7ef43cdfe559p@chr3:98672197..98672201, +
2.58e-34FFCP PHASE2:Hg19::chr3:98672197..98672201,+#_0d5ce5cdb930052b42ac7ef43cdfe559p@chr3:98672197..98672201, +
2.58e-34FFCP PHASE1:Hg19::chr11:31667372..31667383,-#_0d5ce5cdb930052b42ac7ef43cdfe559p@chr11:31667372..31667383, -
3.61e-34FFCP PHASE2:Hg19::chr15:69339407..69339410,+#_97ea7338b708cc8efda0dd3d46df3f30p3@NOX5
3.61e-34FFCP PHASE1:Hg19::chr15:69339407..69339410,+#_97ea7338b708cc8efda0dd3d46df3f30p3@NOX5
7.06e-34FFCP PHASE1:Hg19::chr1:8938123..8938135,-#_3ddb1b2f9a86308e53ff815d2833a8adp3@ENO1-IT1
7.06e-34FFCP PHASE2:Hg19::chr14:85705824..85705844,-#_3ddb1b2f9a86308e53ff815d2833a8adp1@ENST00000556016
7.06e-34FFCP PHASE2:Hg19::chr14:61929802..61929817,+#_3ddb1b2f9a86308e53ff815d2833a8adp35@PRKCH
7.06e-34FFCP PHASE2:Hg19::chr1:8938123..8938135,-#_3ddb1b2f9a86308e53ff815d2833a8adp3@ENO1-IT1
7.06e-34FFCP PHASE1:Hg19::chr14:85705824..85705844,-#_3ddb1b2f9a86308e53ff815d2833a8adp1@ENST00000556016
7.06e-34FFCP PHASE1:Hg19::chr14:61929802..61929817,+#_3ddb1b2f9a86308e53ff815d2833a8adp35@PRKCH
7.48e-30FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_bf5b8c18089b445675dbacb34966e2e8p1@BC033145
7.48e-30FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_bf5b8c18089b445675dbacb34966e2e8p1@BC033145
9.99e-30FFCP PHASE1:Hg19::chr9:75489043..75489052,-#_7e3e5169fda8330d72931f50ed6df6e7p1@ENST00000453787
9.99e-30FFCP PHASE2:Hg19::chr9:75489043..75489052,-#_7e3e5169fda8330d72931f50ed6df6e7p1@ENST00000453787
1.33e-29FFCP PHASE1:Hg19::chr7:43417422..43417435,+#_d8fbe24e71cfc749b62bd5d27d6df4fdp16@HECW1
1.33e-29FFCP PHASE2:Hg19::chr7:43417422..43417435,+#_d8fbe24e71cfc749b62bd5d27d6df4fdp16@HECW1
2.37e-29FFCP PHASE2:Hg19::chr21:16374688..16374703,-#_64f9df93c1e1df8cd6164969e5195d21p6@NRIP1
2.37e-29FFCP PHASE1:Hg19::chr21:16374688..16374703,-#_64f9df93c1e1df8cd6164969e5195d21p6@NRIP1
3.16e-29FFCP PHASE2:Hg19::chr10:91043389..91043400,+#_d38daf326324c720b3ab66d267e517c1p3@ENST00000444849
3.16e-29FFCP PHASE2:Hg19::chr7:151433200..151433217,-#_d38daf326324c720b3ab66d267e517c1p31@PRKAG2
3.16e-29FFCP PHASE1:Hg19::chr10:91043389..91043400,+#_d38daf326324c720b3ab66d267e517c1p3@ENST00000444849
3.16e-29FFCP PHASE1:Hg19::chr7:151433200..151433217,-#_d38daf326324c720b3ab66d267e517c1p31@PRKAG2
4.2e-29FFCP PHASE2:Hg19::chr12:13025302..13025313,+#_4b3e3f4b19b95af90043664dec717945p@chr12:13025302..13025313, +
4.2e-29FFCP PHASE1:Hg19::chr12:13025302..13025313,+#_4b3e3f4b19b95af90043664dec717945p@chr12:13025302..13025313, +
5.93e-26FFCP PHASE1:Hg19::chr6:125540724..125540736,+#_0386ce40499aac81dc48d08482665643p12@TPD52L1
5.93e-26FFCP PHASE2:Hg19::chr6:125540724..125540736,+#_0386ce40499aac81dc48d08482665643p12@TPD52L1
9.79e-26FFCP PHASE1:Hg19::chr21:41160614..41160621,+#_53c288489428d2de14ab2042aaee147dp@chr21:41160614..41160621, +
9.79e-26FFCP PHASE2:Hg19::chr21:41160614..41160621,+#_53c288489428d2de14ab2042aaee147dp@chr21:41160614..41160621, +
2.1e-23FFCP PHASE2:Hg19::chr14:61929948..61929975,+#_b36d0c17176e992cb790186d346d55e7p20@PRKCH
2.1e-23FFCP PHASE1:Hg19::chr14:61929948..61929975,+#_b36d0c17176e992cb790186d346d55e7p20@PRKCH
4.1e-23FFCP PHASE1:Hg19::chr2:16804394..16804406,-#_eec5b34d37ff74e6f4b7b35c1fff6855p6@FAM49A
4.1e-23FFCP PHASE2:Hg19::chr2:16804394..16804406,-#_eec5b34d37ff74e6f4b7b35c1fff6855p6@FAM49A
1.88e-21FFCP PHASE2:Hg19::chr3:55002159..55002164,+#_56bc394fc8e202b021d41aa23761c397p@chr3:55002159..55002164, +
1.88e-21FFCP PHASE1:Hg19::chr3:55002159..55002164,+#_56bc394fc8e202b021d41aa23761c397p@chr3:55002159..55002164, +
4.22e-21FFCP PHASE1:Hg19::chr21:16374660..16374679,-#_72a23d6460c071e520f26e311a96cd47p4@NRIP1
4.22e-21FFCP PHASE2:Hg19::chr21:16374660..16374679,-#_72a23d6460c071e520f26e311a96cd47p4@NRIP1
6.31e-21FFCP PHASE1:Hg19::chr10:91043499..91043510,+#_f50f5d28e88c875e938fd6669ced3844p2@ENST00000354541
6.31e-21FFCP PHASE1:Hg19::chr8:145011875..145011879,+#_f50f5d28e88c875e938fd6669ced3844p@chr8:145011875..145011879, +
6.31e-21FFCP PHASE2:Hg19::chr8:145011875..145011879,+#_f50f5d28e88c875e938fd6669ced3844p@chr8:145011875..145011879, +
6.31e-21FFCP PHASE2:Hg19::chr10:91043499..91043510,+#_f50f5d28e88c875e938fd6669ced3844p2@ENST00000354541
7.72e-21FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_c8a8bc3ae7babec1400c0bfe93647974p@chr8:124692287..124692298, +
7.72e-21FFCP PHASE2:Hg19::chr15:67524744..67524745,+#_c8a8bc3ae7babec1400c0bfe93647974p1@ENST00000497294
7.72e-21FFCP PHASE1:Hg19::chr15:67524744..67524745,+#_c8a8bc3ae7babec1400c0bfe93647974p1@ENST00000497294
7.72e-21FFCP PHASE1:Hg19::chr11:31014065..31014073,-#_c8a8bc3ae7babec1400c0bfe93647974p1@DCDC5
7.72e-21FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_c8a8bc3ae7babec1400c0bfe93647974p@chr8:124692287..124692298, +
7.72e-21FFCP PHASE2:Hg19::chr11:31014065..31014073,-#_c8a8bc3ae7babec1400c0bfe93647974p1@DCDC5
9.43e-21FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_2c368347968a8719e51db1ac81f658fbp1@CLRN1
9.43e-21FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_2c368347968a8719e51db1ac81f658fbp1@CLRN1
1.3e-19FFCP PHASE2:Hg19::chr14:87636652..87636657,-#_43efb6e1a71b612051c4f6c0d22b4990p@chr14:87636652..87636657, -
1.3e-19FFCP PHASE1:Hg19::chr14:87636652..87636657,-#_43efb6e1a71b612051c4f6c0d22b4990p@chr14:87636652..87636657, -
2.25e-19FFCP PHASE2:Hg19::chr14:61929781..61929801,+#_415965b86688b1c404782fc84b88216ap27@PRKCH
2.25e-19FFCP PHASE1:Hg19::chr14:61929781..61929801,+#_415965b86688b1c404782fc84b88216ap27@PRKCH
3.25e-19FFCP PHASE1:Hg19::chrX:106243285..106243290,-#_cd0344f02029e3794c1800b37ce2d4adp8@MORC4
3.25e-19FFCP PHASE1:Hg19::chr3:147131290..147131301,+#_cd0344f02029e3794c1800b37ce2d4adp@chr3:147131290..147131301, +
3.25e-19FFCP PHASE2:Hg19::chrX:106243285..106243290,-#_cd0344f02029e3794c1800b37ce2d4adp8@MORC4
3.25e-19FFCP PHASE2:Hg19::chr3:147131290..147131301,+#_cd0344f02029e3794c1800b37ce2d4adp@chr3:147131290..147131301, +
3.91e-19FFCP PHASE1:Hg19::chr14:62037117..62037132,+#_2cd3196c0b6e39e13ce8c2bee98578b5p7@FLJ22447
3.91e-19FFCP PHASE2:Hg19::chr14:62037117..62037132,+#_2cd3196c0b6e39e13ce8c2bee98578b5p7@FLJ22447
4.44e-18FFCP PHASE1:Hg19::chr4:150666211..150666212,+#_ed809b2ceb1b79330b4fbfc8bd8786b9p@chr4:150666211..150666212, +
4.44e-18FFCP PHASE2:Hg19::chr4:150666211..150666212,+#_ed809b2ceb1b79330b4fbfc8bd8786b9p@chr4:150666211..150666212, +
5.26e-18FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_0eda4cfd0c9e1dfcf8a48bd001e30e65p7@PTPRU
5.26e-18FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_0eda4cfd0c9e1dfcf8a48bd001e30e65p7@PTPRU
6.23e-18FFCP PHASE1:Hg19::chr5:138852090..138852095,+#_569e051fa084d45d9c53cdfdce471248p@chr5:138852090..138852095, +
6.23e-18FFCP PHASE2:Hg19::chr5:138852090..138852095,+#_569e051fa084d45d9c53cdfdce471248p@chr5:138852090..138852095, +

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