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{{CL
{{CL
|id=CL:0002567
|alt_id=
|name=light melanocyte
|namespace=cell
|def="A melanocyte that appears lighter in color." [GOC:tfm]
|xref=
|is_a=CL:0000148
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-01T05:58:23Z
|def="A melanocyte that appears lighter in color." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002567
|is_a=CL:0000148
|is_obsolete=
|located_in=
|located_in=
|name=light melanocyte
|namespace=FANTOM
|obo_creation_date=2011-03-01T05:58:23Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:44, 12 September 2014

Name:light melanocyte
Namespace:FANTOM
Definition:"A melanocyte that appears lighter in color." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-01T05:58:23Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000148(melanocyte)



Children


derives from:FF:0000090 (human light melanocyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002567 (light melanocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.27e-147FFCP PHASE2:Hg19::chr16:1521954..1521959,-#_09ada711669176c4510d98d3fffb9773p@chr16:1521954..1521959, -
3.27e-147FFCP PHASE1:Hg19::chr16:1521954..1521959,-#_09ada711669176c4510d98d3fffb9773p@chr16:1521954..1521959, -
5.41e-147FFCP PHASE2:Hg19::chr19:3544594..3544603,-#_5df80bf680dc4f69911e42a5a750cc1ap@chr19:3544594..3544603, -
5.41e-147FFCP PHASE1:Hg19::chr19:3544594..3544603,-#_5df80bf680dc4f69911e42a5a750cc1ap@chr19:3544594..3544603, -
1.47e-146FFCP PHASE2:Hg19::chr22:38368691..38368700,-#_8ddd2878775fb3a4924d09fdaa2efb48p@chr22:38368691..38368700, -
1.47e-146FFCP PHASE1:Hg19::chr22:38368691..38368700,-#_8ddd2878775fb3a4924d09fdaa2efb48p@chr22:38368691..38368700, -
5.2e-118FFCP PHASE2:Hg19::chr16:84074735..84074743,+#_e9b740db75e61a5f1b71ff949e41addbp@chr16:84074735..84074743, +
5.2e-118FFCP PHASE2:Hg19::chr16:68678892..68678897,+#_e9b740db75e61a5f1b71ff949e41addbp12@CDH3
5.2e-118FFCP PHASE2:Hg19::chr8:20111535..20111554,-#_e9b740db75e61a5f1b71ff949e41addbp@chr8:20111535..20111554, -
5.2e-118FFCP PHASE1:Hg19::chr16:84074735..84074743,+#_e9b740db75e61a5f1b71ff949e41addbp@chr16:84074735..84074743, +
5.2e-118FFCP PHASE2:Hg19::chr19:3554540..3554542,-#_e9b740db75e61a5f1b71ff949e41addbp@chr19:3554540..3554542, -
5.2e-118FFCP PHASE1:Hg19::chr16:68678892..68678897,+#_e9b740db75e61a5f1b71ff949e41addbp12@CDH3
5.2e-118FFCP PHASE1:Hg19::chr8:20111535..20111554,-#_e9b740db75e61a5f1b71ff949e41addbp@chr8:20111535..20111554, -
5.2e-118FFCP PHASE1:Hg19::chr19:3554540..3554542,-#_e9b740db75e61a5f1b71ff949e41addbp@chr19:3554540..3554542, -
7.78e-118FFCP PHASE1:Hg19::chr4:4343850..4343857,+#_80db601ca369087547a2bd546335b1b3p@chr4:4343850..4343857, +
7.78e-118FFCP PHASE2:Hg19::chr4:4343850..4343857,+#_80db601ca369087547a2bd546335b1b3p@chr4:4343850..4343857, +
2.59e-117FFCP PHASE2:Hg19::chr8:29605929..29605934,+#_6703e16c9fd037b216b33225492c843ap4@ENST00000517491
2.59e-117FFCP PHASE1:Hg19::chr8:29605929..29605934,+#_6703e16c9fd037b216b33225492c843ap4@ENST00000517491
5.69e-99FFCP PHASE2:Hg19::chr19:3557800..3557811,-#_18773b00049986ff6808b98b4b2eed08p9@MFSD12
5.69e-99FFCP PHASE1:Hg19::chr19:3557800..3557811,-#_18773b00049986ff6808b98b4b2eed08p9@MFSD12
7.95e-99FFCP PHASE2:Hg19::chr17:77925869..77925876,-#_106099a7598dfc4b6a002607a742258cp@chr17:77925869..77925876, -
7.95e-99FFCP PHASE1:Hg19::chr17:77925869..77925876,-#_106099a7598dfc4b6a002607a742258cp@chr17:77925869..77925876, -
7.95e-99FFCP PHASE2:Hg19::chr11:2920857..2920864,+#_106099a7598dfc4b6a002607a742258cp13@SLC22A18
7.95e-99FFCP PHASE1:Hg19::chr11:2920857..2920864,+#_106099a7598dfc4b6a002607a742258cp13@SLC22A18
1.55e-98FFCP PHASE2:Hg19::chr15:28360857..28360860,-#_6d843aaecf9e681a0e7a467ad032d72fp@chr15:28360857..28360860, -
1.55e-98FFCP PHASE2:Hg19::chr1:1497446..1497455,-#_6d843aaecf9e681a0e7a467ad032d72fp4@AK129493
1.55e-98FFCP PHASE2:Hg19::chr16:68678879..68678886,+#_6d843aaecf9e681a0e7a467ad032d72fp10@CDH3
1.55e-98FFCP PHASE2:Hg19::chr17:77923816..77923828,-#_6d843aaecf9e681a0e7a467ad032d72fp@chr17:77923816..77923828, -
1.55e-98FFCP PHASE1:Hg19::chr1:1497446..1497455,-#_6d843aaecf9e681a0e7a467ad032d72fp4@AK129493
1.55e-98FFCP PHASE1:Hg19::chr16:68678879..68678886,+#_6d843aaecf9e681a0e7a467ad032d72fp10@CDH3
1.55e-98FFCP PHASE1:Hg19::chr17:77923816..77923828,-#_6d843aaecf9e681a0e7a467ad032d72fp@chr17:77923816..77923828, -
1.55e-98FFCP PHASE1:Hg19::chr15:28360857..28360860,-#_6d843aaecf9e681a0e7a467ad032d72fp@chr15:28360857..28360860, -
2.17e-98FFCP PHASE2:Hg19::chr15:42694546..42694554,+#_b4504f5e839e3d65f76ad84f1d3f5cddp18@CAPN3
2.17e-98FFCP PHASE1:Hg19::chr9:12709019..12709029,+#_b4504f5e839e3d65f76ad84f1d3f5cddp@chr9:12709019..12709029, +
2.17e-98FFCP PHASE2:Hg19::chr1:212594718..212594723,+#_b4504f5e839e3d65f76ad84f1d3f5cddp@chr1:212594718..212594723, +
2.17e-98FFCP PHASE1:Hg19::chr15:28360793..28360804,-#_b4504f5e839e3d65f76ad84f1d3f5cddp@chr15:28360793..28360804, -
2.17e-98FFCP PHASE1:Hg19::chr15:42694546..42694554,+#_b4504f5e839e3d65f76ad84f1d3f5cddp18@CAPN3
2.17e-98FFCP PHASE1:Hg19::chr1:212594718..212594723,+#_b4504f5e839e3d65f76ad84f1d3f5cddp@chr1:212594718..212594723, +
2.17e-98FFCP PHASE2:Hg19::chr9:12709019..12709029,+#_b4504f5e839e3d65f76ad84f1d3f5cddp@chr9:12709019..12709029, +
2.17e-98FFCP PHASE2:Hg19::chr15:28360793..28360804,-#_b4504f5e839e3d65f76ad84f1d3f5cddp@chr15:28360793..28360804, -
3.03e-98FFCP PHASE1:Hg19::chr1:1497566..1497576,-#_06ba17450a83cd010da71ac32e008838p3@AK129493
3.03e-98FFCP PHASE1:Hg19::chr15:42694665..42694671,+#_06ba17450a83cd010da71ac32e008838p16@CAPN3
3.03e-98FFCP PHASE2:Hg19::chr15:42694665..42694671,+#_06ba17450a83cd010da71ac32e008838p16@CAPN3
3.03e-98FFCP PHASE2:Hg19::chr1:1497566..1497576,-#_06ba17450a83cd010da71ac32e008838p3@AK129493
5.92e-98FFCP PHASE2:Hg19::chr7:46799446..46799457,-#_f36dd585097876a777f389959cb118fdp1@ENST00000487094
5.92e-98FFCP PHASE1:Hg19::chr7:46799446..46799457,-#_f36dd585097876a777f389959cb118fdp1@ENST00000487094
6.24e-88FFCP PHASE1:Hg19::chr7:20685431..20685438,+#_5fbf0165acf628aa820d8837cef530fep@chr7:20685431..20685438, +
6.24e-88FFCP PHASE2:Hg19::chr22:26899907..26899914,-#_5fbf0165acf628aa820d8837cef530fep@chr22:26899907..26899914, -
6.24e-88FFCP PHASE1:Hg19::chr22:26899907..26899914,-#_5fbf0165acf628aa820d8837cef530fep@chr22:26899907..26899914, -
6.24e-88FFCP PHASE2:Hg19::chr7:20685431..20685438,+#_5fbf0165acf628aa820d8837cef530fep@chr7:20685431..20685438, +
9.74e-88FFCP PHASE1:Hg19::chr5:159904569..159904581,-#_50cd44c80a1d050a0599e420fba04a8ap@chr5:159904569..159904581, -
9.74e-88FFCP PHASE1:Hg19::chr1:207083343..207083348,-#_50cd44c80a1d050a0599e420fba04a8ap19@FAIM3
9.74e-88FFCP PHASE1:Hg19::chr10:106240041..106240047,-#_50cd44c80a1d050a0599e420fba04a8ap1@ENST00000447860
9.74e-88FFCP PHASE2:Hg19::chr21:38568227..38568233,+#_50cd44c80a1d050a0599e420fba04a8ap@chr21:38568227..38568233, +
9.74e-88FFCP PHASE2:Hg19::chr10:106240041..106240047,-#_50cd44c80a1d050a0599e420fba04a8ap1@ENST00000447860
9.74e-88FFCP PHASE2:Hg19::chr5:159904569..159904581,-#_50cd44c80a1d050a0599e420fba04a8ap@chr5:159904569..159904581, -
9.74e-88FFCP PHASE1:Hg19::chr21:38568227..38568233,+#_50cd44c80a1d050a0599e420fba04a8ap@chr21:38568227..38568233, +
9.74e-88FFCP PHASE2:Hg19::chr1:207083343..207083348,-#_50cd44c80a1d050a0599e420fba04a8ap19@FAIM3
1.52e-87FFCP PHASE1:Hg19::chr10:93335091..93335099,-#_988c400561700b08b529e4a549c15f24p6@BC044257
1.52e-87FFCP PHASE2:Hg19::chr10:93335091..93335099,-#_988c400561700b08b529e4a549c15f24p6@BC044257
1.52e-87FFCP PHASE2:Hg19::chr16:68678900..68678907,+#_988c400561700b08b529e4a549c15f24p11@CDH3
1.52e-87FFCP PHASE1:Hg19::chr16:68678900..68678907,+#_988c400561700b08b529e4a549c15f24p11@CDH3
2.28e-85FFCP PHASE1:Hg19::chr19:3557867..3557877,-#_24050f87fba5b1203897f9719fdbe7abp7@MFSD12
2.28e-85FFCP PHASE2:Hg19::chr19:3547999..3548008,-#_24050f87fba5b1203897f9719fdbe7abp@chr19:3547999..3548008, -
2.28e-85FFCP PHASE1:Hg19::chr8:41467069..41467095,+#_24050f87fba5b1203897f9719fdbe7abp@chr8:41467069..41467095, +
2.28e-85FFCP PHASE1:Hg19::chr19:3547999..3548008,-#_24050f87fba5b1203897f9719fdbe7abp@chr19:3547999..3548008, -
2.28e-85FFCP PHASE2:Hg19::chr5:159896855..159896863,+#_24050f87fba5b1203897f9719fdbe7abp@chr5:159896855..159896863, +
2.28e-85FFCP PHASE2:Hg19::chr19:3557867..3557877,-#_24050f87fba5b1203897f9719fdbe7abp7@MFSD12
2.28e-85FFCP PHASE1:Hg19::chr5:159896855..159896863,+#_24050f87fba5b1203897f9719fdbe7abp@chr5:159896855..159896863, +
2.28e-85FFCP PHASE2:Hg19::chr8:41467069..41467095,+#_24050f87fba5b1203897f9719fdbe7abp@chr8:41467069..41467095, +
3.04e-85FFCP PHASE2:Hg19::chr19:3572689..3572697,+#_d9c89051fd8c878c7cc0fefaf0c378f7p22@HMG20B
3.04e-85FFCP PHASE1:Hg19::chr19:3572689..3572697,+#_d9c89051fd8c878c7cc0fefaf0c378f7p22@HMG20B
4.06e-85FFCP PHASE1:Hg19::chr13:49155067..49155077,-#_d2ee3106ebd31fb6075f6069ee22c8aep@chr13:49155067..49155077, -
4.06e-85FFCP PHASE2:Hg19::chr16:89986251..89986268,+#_d2ee3106ebd31fb6075f6069ee22c8aep@chr16:89986251..89986268, +
4.06e-85FFCP PHASE1:Hg19::chr16:89986251..89986268,+#_d2ee3106ebd31fb6075f6069ee22c8aep@chr16:89986251..89986268, +
4.06e-85FFCP PHASE2:Hg19::chr13:49155067..49155077,-#_d2ee3106ebd31fb6075f6069ee22c8aep@chr13:49155067..49155077, -
5.41e-85FFCP PHASE2:Hg19::chr17:77925835..77925864,+#_ff956ca9a078a19958bc908159bedc3ep@chr17:77925835..77925864, +
5.41e-85FFCP PHASE1:Hg19::chr19:3546150..3546160,-#_ff956ca9a078a19958bc908159bedc3ep@chr19:3546150..3546160, -
5.41e-85FFCP PHASE1:Hg19::chr17:77925835..77925864,+#_ff956ca9a078a19958bc908159bedc3ep@chr17:77925835..77925864, +
5.41e-85FFCP PHASE2:Hg19::chr19:3546150..3546160,-#_ff956ca9a078a19958bc908159bedc3ep@chr19:3546150..3546160, -
7.21e-85FFCP PHASE1:Hg19::chr1:154401791..154401807,+#_f98c99efaef423847ef4905cbc9dae53p11@IL6R
7.21e-85FFCP PHASE2:Hg19::chr8:29605633..29605652,-#_f98c99efaef423847ef4905cbc9dae53p2@C8orf75
7.21e-85FFCP PHASE1:Hg19::chr8:29605633..29605652,-#_f98c99efaef423847ef4905cbc9dae53p2@C8orf75
7.21e-85FFCP PHASE2:Hg19::chr1:154401791..154401807,+#_f98c99efaef423847ef4905cbc9dae53p11@IL6R
1.28e-84FFCP PHASE2:Hg19::chr1:2491291..2491303,+#_e7ca4ade67ac7df31e9eefea9e580d22p18@TNFRSF14
1.28e-84FFCP PHASE1:Hg19::chr1:2491291..2491303,+#_e7ca4ade67ac7df31e9eefea9e580d22p18@TNFRSF14
1.28e-84FFCP PHASE2:Hg19::chr15:42694558..42694570,+#_e7ca4ade67ac7df31e9eefea9e580d22p10@CAPN3
1.28e-84FFCP PHASE1:Hg19::chr15:42694558..42694570,+#_e7ca4ade67ac7df31e9eefea9e580d22p10@CAPN3
1.71e-84FFCP PHASE2:Hg19::chr12:102091093..102091104,+#_582be8e1242dbe0cfb8572752c9d9771p13@CHPT1
1.71e-84FFCP PHASE1:Hg19::chr12:102091093..102091104,+#_582be8e1242dbe0cfb8572752c9d9771p13@CHPT1
1.71e-84FFCP PHASE2:Hg19::chr20:61299155..61299169,+#_582be8e1242dbe0cfb8572752c9d9771p10@SLCO4A1
1.71e-84FFCP PHASE1:Hg19::chr20:61299155..61299169,+#_582be8e1242dbe0cfb8572752c9d9771p10@SLCO4A1
1.71e-84FFCP PHASE2:Hg19::chr1:1497497..1497523,-#_582be8e1242dbe0cfb8572752c9d9771p1@AK129493
1.71e-84FFCP PHASE2:Hg19::chr20:55091858..55091864,+#_582be8e1242dbe0cfb8572752c9d9771p5@FAM209A
1.71e-84FFCP PHASE1:Hg19::chr1:1497497..1497523,-#_582be8e1242dbe0cfb8572752c9d9771p1@AK129493
1.71e-84FFCP PHASE1:Hg19::chr20:55091858..55091864,+#_582be8e1242dbe0cfb8572752c9d9771p5@FAM209A
2.27e-84FFCP PHASE2:Hg19::chr6:4610902..4610913,+#_59641487cd6921f1315193293629fba7p1@ENST00000380106
2.27e-84FFCP PHASE1:Hg19::chr8:29605860..29605870,+#_59641487cd6921f1315193293629fba7p3@ENST00000517491
2.27e-84FFCP PHASE1:Hg19::chr6:4610902..4610913,+#_59641487cd6921f1315193293629fba7p1@ENST00000380106
2.27e-84FFCP PHASE2:Hg19::chr9:12708978..12708990,+#_59641487cd6921f1315193293629fba7p@chr9:12708978..12708990, +

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