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{{CL
{{CL
|id=CL:0002583
|alt_id=
|name=subcutaneous preadipocyte
|namespace=cell
|def="A preadipocyte that is part of subcutaneous tissue." [GOC:tfm]
|xref=
|is_a=CL:0002334
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-03T04:33:01Z
|def="A preadipocyte that is part of subcutaneous tissue." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002583
|is_a=CL:0002334
|is_obsolete=
|located_in=
|located_in=
|name=subcutaneous preadipocyte
|namespace=FANTOM
|obo_creation_date=2011-03-03T04:33:01Z
|part_of=UBERON:0002072
|part_of=UBERON:0002072
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:45, 12 September 2014

Name:subcutaneous preadipocyte
Namespace:FANTOM
Definition:"A preadipocyte that is part of subcutaneous tissue." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-03T04:33:01Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002334(preadipocyte)
part_of:UBERON:0002072(hypodermis)



Children


derives from:FF:0000142 (human subcutaneous preadipocyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002583 (subcutaneous preadipocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.96e-66FFCP PHASE2:Hg19::chr20:61368258..61368275,+#_6514a6a9ea6425bc49ad01a5b25142d1p@chr20:61368258..61368275, +
3.96e-66FFCP PHASE1:Hg19::chr20:61368258..61368275,+#_6514a6a9ea6425bc49ad01a5b25142d1p@chr20:61368258..61368275, +
2.74e-50FFCP PHASE2:Hg19::chr11:102712977..102712984,-#_eb56a22254689cd7f09987864323b546p@chr11:102712977..102712984, -
2.74e-50FFCP PHASE1:Hg19::chr11:102712977..102712984,-#_eb56a22254689cd7f09987864323b546p@chr11:102712977..102712984, -
4.52e-50FFCP PHASE2:Hg19::chr5:150159331..150159340,-#_f5518bec16de523c0d1fce22c74abf66p@chr5:150159331..150159340, -
4.52e-50FFCP PHASE1:Hg19::chr5:150159331..150159340,-#_f5518bec16de523c0d1fce22c74abf66p@chr5:150159331..150159340, -
1.1e-40FFCP PHASE2:Hg19::chr9:1051481..1051496,+#_bf52265b3647800214c6bc8a38032cefp3@DMRT2
1.1e-40FFCP PHASE1:Hg19::chr9:1051481..1051496,+#_bf52265b3647800214c6bc8a38032cefp3@DMRT2
1.89e-37FFCP PHASE1:Hg19::chr3:13610185..13610194,+#_0c49e2d3fe83cf78a29a09788a7a5ac8p9@FBLN2
1.89e-37FFCP PHASE2:Hg19::chr3:13610185..13610194,+#_0c49e2d3fe83cf78a29a09788a7a5ac8p9@FBLN2
5.69e-37FFCP PHASE1:Hg19::chr1:9262795..9262800,-#_ceb233a2315298cd25ba06acf3825f86p3@ENST00000437157
5.69e-37FFCP PHASE2:Hg19::chr1:9262795..9262800,-#_ceb233a2315298cd25ba06acf3825f86p3@ENST00000437157
7.05e-34FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_c077213852b82f6124f218381c031646p@chr11:131614903..131614910, -
7.05e-34FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_c077213852b82f6124f218381c031646p@chr11:131614903..131614910, -
9.92e-34FFCP PHASE2:Hg19::chr11:69867119..69867131,-#_43f077a4ad6193e95f6dfdbdc64cc1b6p1@ENST00000528507
9.92e-34FFCP PHASE1:Hg19::chr11:69867119..69867131,-#_43f077a4ad6193e95f6dfdbdc64cc1b6p1@ENST00000528507
3.35e-32FFCP PHASE2:Hg19::chr15:74704015..74704027,-#_a3bed2a56d3d948068cb513f2c0b1732p@chr15:74704015..74704027, -
3.35e-32FFCP PHASE1:Hg19::chr15:74704015..74704027,-#_a3bed2a56d3d948068cb513f2c0b1732p@chr15:74704015..74704027, -
4.71e-31FFCP PHASE2:Hg19::chrX:2670326..2670334,+#_a718ab148dcee64ddf40a7ba4f2935afp1@XGPY2, p8@XG
4.71e-31FFCP PHASE1:Hg19::chrX:2670326..2670334,+#_a718ab148dcee64ddf40a7ba4f2935afp1@XGPY2, p8@XG
6.02e-30FFCP PHASE2:Hg19::chr17:8747590..8747595,-#_a5c97326a7fd3701d735d892bcc52ddcp@chr17:8747590..8747595, -
6.02e-30FFCP PHASE1:Hg19::chr17:8747590..8747595,-#_a5c97326a7fd3701d735d892bcc52ddcp@chr17:8747590..8747595, -
7.1e-28FFCP PHASE2:Hg19::chr1:9262713..9262723,-#_4f1d6827cc0e9386408b2ee23b3e4ec7p2@ENST00000437157
7.1e-28FFCP PHASE1:Hg19::chr1:9262713..9262723,-#_4f1d6827cc0e9386408b2ee23b3e4ec7p2@ENST00000437157
1.07e-27FFCP PHASE1:Hg19::chr8:139753474..139753492,-#_a7b154198644e498d9cba5397f538b26p@chr8:139753474..139753492, -
1.07e-27FFCP PHASE2:Hg19::chr8:139753474..139753492,-#_a7b154198644e498d9cba5397f538b26p@chr8:139753474..139753492, -
5.56e-26FFCP PHASE2:Hg19::chr7:137160998..137161001,-#_25c165e497cea2637bcaf4e716e2b582p@chr7:137160998..137161001, -
5.56e-26FFCP PHASE1:Hg19::chr7:137160998..137161001,-#_25c165e497cea2637bcaf4e716e2b582p@chr7:137160998..137161001, -
1.85e-25FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_70ffcaf3236c44bd8dab6029e6dfa1a2p@chr21:47405885..47405896, +
1.85e-25FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_70ffcaf3236c44bd8dab6029e6dfa1a2p@chr21:47405885..47405896, +
3.89e-25FFCP PHASE2:Hg19::chr6:35216360..35216374,+#_0b8e5bc71a30bf0843484affb4b3ffe0p10@SCUBE3
3.89e-25FFCP PHASE1:Hg19::chr6:35216360..35216374,+#_0b8e5bc71a30bf0843484affb4b3ffe0p10@SCUBE3
1.29e-24FFCP PHASE1:Hg19::chrX:133733457..133733463,+#_d2443e72541325be745d848d8f8ae152p1@ENST00000440614
1.29e-24FFCP PHASE2:Hg19::chrX:133733457..133733463,+#_d2443e72541325be745d848d8f8ae152p1@ENST00000440614
2.23e-23FFCP PHASE2:Hg19::chrX:133681692..133681696,-#_2fb7a1122e2ac2a132c971d46e258651p@chrX:133681692..133681696, -
2.23e-23FFCP PHASE1:Hg19::chrX:133681692..133681696,-#_2fb7a1122e2ac2a132c971d46e258651p@chrX:133681692..133681696, -
4.86e-22FFCP PHASE2:Hg19::chr11:102712933..102712947,-#_21bf9e53f5859b6c254c8d5306291bf3p@chr11:102712933..102712947, -
4.86e-22FFCP PHASE1:Hg19::chr11:102712933..102712947,-#_21bf9e53f5859b6c254c8d5306291bf3p@chr11:102712933..102712947, -
4.66e-21FFCP PHASE1:Hg19::chr1:7361033..7361052,-#_480376b8fc9ca6cfbdcc12dc7995b995p@chr1:7361033..7361052, -
4.66e-21FFCP PHASE2:Hg19::chr1:7361033..7361052,-#_480376b8fc9ca6cfbdcc12dc7995b995p@chr1:7361033..7361052, -
6.96e-21FFCP PHASE2:Hg19::chr1:215157270..215157279,+#_71ac0c820f498816b8df521d7a23b80ap@chr1:215157270..215157279, +
6.96e-21FFCP PHASE1:Hg19::chr1:215157270..215157279,+#_71ac0c820f498816b8df521d7a23b80ap@chr1:215157270..215157279, +
4.9e-20FFCP PHASE1:Hg19::chr8:27529996..27530008,+#_7918ad55463c1f04c742aa10fe35c7bcp@chr8:27529996..27530008, +
4.9e-20FFCP PHASE2:Hg19::chr8:27529996..27530008,+#_7918ad55463c1f04c742aa10fe35c7bcp@chr8:27529996..27530008, +
6.54e-20FFCP PHASE2:Hg19::chr21:47405899..47405911,+#_1bdeccda91ca36b5ead5ba66c339e8a9p@chr21:47405899..47405911, +
6.54e-20FFCP PHASE1:Hg19::chr21:47405899..47405911,+#_1bdeccda91ca36b5ead5ba66c339e8a9p@chr21:47405899..47405911, +
1.03e-19FFCP PHASE2:Hg19::chr6:35217101..35217114,+#_fcfe08b9ae951a3dc4ff3579dc4b05c9p@chr6:35217101..35217114, +
1.03e-19FFCP PHASE1:Hg19::chr6:35217101..35217114,+#_fcfe08b9ae951a3dc4ff3579dc4b05c9p@chr6:35217101..35217114, +
9.18e-19FFCP PHASE2:Hg19::chr1:243419021..243419028,-#_51217e2eccec2db7274c537ae6c5a9e7p20@CEP170
9.18e-19FFCP PHASE1:Hg19::chr1:243419021..243419028,-#_51217e2eccec2db7274c537ae6c5a9e7p20@CEP170
2.9e-18FFCP PHASE2:Hg19::chr19:51227333..51227347,+#_7e7e5cbb6842cf01a8f2cb7aadc51a89p@chr19:51227333..51227347, +
2.9e-18FFCP PHASE1:Hg19::chr19:51227333..51227347,+#_7e7e5cbb6842cf01a8f2cb7aadc51a89p@chr19:51227333..51227347, +
5.48e-18FFCP PHASE2:Hg19::chr1:45088343..45088354,+#_71abc397be67a865431658f848a28440p@chr1:45088343..45088354, +
5.48e-18FFCP PHASE1:Hg19::chr1:45088343..45088354,+#_71abc397be67a865431658f848a28440p@chr1:45088343..45088354, +
1.04e-17FFCP PHASE2:Hg19::chr1:215157211..215157225,+#_85f9900faa85b4bbf58f45b1559437bdp@chr1:215157211..215157225, +
1.04e-17FFCP PHASE1:Hg19::chr1:215157211..215157225,+#_85f9900faa85b4bbf58f45b1559437bdp@chr1:215157211..215157225, +
1.27e-17FFCP PHASE2:Hg19::chr13:28896641..28896653,-#_fe6e12d8bba35da457a81746398a889ap5@FLT1
1.27e-17FFCP PHASE1:Hg19::chr13:28896641..28896653,-#_fe6e12d8bba35da457a81746398a889ap5@FLT1
1.37e-17FFCP PHASE1:Hg19::chr6:35211380..35211391,+#_863bfd506b86f994fcf7f6dff8f586ebp@chr6:35211380..35211391, +
1.37e-17FFCP PHASE2:Hg19::chr6:35211380..35211391,+#_863bfd506b86f994fcf7f6dff8f586ebp@chr6:35211380..35211391, +
2.87e-17FFCP PHASE2:Hg19::chr5:14440817..14440832,+#_96a220bc1c3b58cd6c90b1427748670bp24@TRIO
2.87e-17FFCP PHASE1:Hg19::chr5:14440817..14440832,+#_96a220bc1c3b58cd6c90b1427748670bp24@TRIO
4.54e-17FFCP PHASE1:Hg19::chr15:74708308..74708313,-#_4e93130577f9596a1b76e85b0e5f5662p@chr15:74708308..74708313, -
4.54e-17FFCP PHASE2:Hg19::chr15:74708308..74708313,-#_4e93130577f9596a1b76e85b0e5f5662p@chr15:74708308..74708313, -
7.9e-17FFCP PHASE2:Hg19::chr17:1972190..1972210,-#_79961b46028be97a5443b13b0603dd8fp@chr17:1972190..1972210, -
7.9e-17FFCP PHASE1:Hg19::chr17:1972190..1972210,-#_79961b46028be97a5443b13b0603dd8fp@chr17:1972190..1972210, -
1.91e-15FFCP PHASE1:Hg19::chr6:83073074..83073093,+#_4b7b9265eeaf9d05a079186b1601ab2dp15@TPBG
1.91e-15FFCP PHASE2:Hg19::chr6:83073074..83073093,+#_4b7b9265eeaf9d05a079186b1601ab2dp15@TPBG
2.36e-15FFCP PHASE2:Hg19::chr11:102710966..102710986,-#_6fe2d15572e8c71159cb17d979a255d4p@chr11:102710966..102710986, -
2.36e-15FFCP PHASE1:Hg19::chr11:102710966..102710986,-#_6fe2d15572e8c71159cb17d979a255d4p@chr11:102710966..102710986, -
2.37e-15FFCP PHASE1:Hg19::chr3:120500144..120500155,+#_1761637c94c7846cbfc6a904da4652dep@chr3:120500144..120500155, +
2.37e-15FFCP PHASE2:Hg19::chr3:120500144..120500155,+#_1761637c94c7846cbfc6a904da4652dep@chr3:120500144..120500155, +
3.22e-15FFCP PHASE2:Hg19::chr14:75081582..75081595,-#_fb4392f986cfb1e5ad3a83321ce22efap@chr14:75081582..75081595, -
3.22e-15FFCP PHASE1:Hg19::chr14:75081582..75081595,-#_fb4392f986cfb1e5ad3a83321ce22efap@chr14:75081582..75081595, -
4.16e-15FFCP PHASE2:Hg19::chr14:38371323..38371347,-#_bcdb9f4434b9c1c6adbfd232e4de6799p1@ENST00000554257, p1@uc001wuk.1
4.16e-15FFCP PHASE1:Hg19::chr14:38371323..38371347,-#_bcdb9f4434b9c1c6adbfd232e4de6799p1@ENST00000554257, p1@uc001wuk.1
4.29e-15FFCP PHASE2:Hg19::chr2:238273001..238273016,+#_aa2b452b3c26b1516135c27caaa80c70p@chr2:238273001..238273016, +
4.29e-15FFCP PHASE1:Hg19::chr2:238273001..238273016,+#_aa2b452b3c26b1516135c27caaa80c70p@chr2:238273001..238273016, +
4.56e-15FFCP PHASE2:Hg19::chr6:35200689..35200695,+#_bc08e424b90beb1e54fd63cd2c2919e7p9@SCUBE3
4.56e-15FFCP PHASE1:Hg19::chr6:35200689..35200695,+#_bc08e424b90beb1e54fd63cd2c2919e7p9@SCUBE3
7.93e-15FFCP PHASE2:Hg19::chr3:170150547..170150552,+#_57b9e97ff0cad69d308f2422ff02fcb1p@chr3:170150547..170150552, +
7.93e-15FFCP PHASE1:Hg19::chr3:170150547..170150552,+#_57b9e97ff0cad69d308f2422ff02fcb1p@chr3:170150547..170150552, +
8.41e-15FFCP PHASE2:Hg19::chr5:14440848..14440864,+#_8c6a602aef7df982a865e40fa5a5e027p22@TRIO
8.41e-15FFCP PHASE1:Hg19::chr5:14440848..14440864,+#_8c6a602aef7df982a865e40fa5a5e027p22@TRIO
1.47e-14FFCP PHASE2:Hg19::chr6:11755328..11755345,-#_7bc14c1d2bbeb7d4e455f910d6324177p@chr6:11755328..11755345, -
1.47e-14FFCP PHASE1:Hg19::chr6:11755328..11755345,-#_7bc14c1d2bbeb7d4e455f910d6324177p@chr6:11755328..11755345, -
2.88e-14FFCP PHASE2:Hg19::chr6:35214004..35214032,+#_316e7ec7a15cc795e1da6dcd06a12234p@chr6:35214004..35214032, +
2.88e-14FFCP PHASE1:Hg19::chr6:35214004..35214032,+#_316e7ec7a15cc795e1da6dcd06a12234p@chr6:35214004..35214032, +
6.43e-14FFCP PHASE2:Hg19::chr6:35219318..35219336,+#_142d8690861a2b0b7f051cb3fe2f4e2ep3@AK123742
6.43e-14FFCP PHASE1:Hg19::chr6:35219318..35219336,+#_142d8690861a2b0b7f051cb3fe2f4e2ep3@AK123742
7.3e-14FFCP PHASE1:Hg19::chr11:102712990..102713003,-#_4ac02023fdcce11b8169886cb94a27bdp@chr11:102712990..102713003, -
7.3e-14FFCP PHASE2:Hg19::chr3:55178388..55178399,-#_4ac02023fdcce11b8169886cb94a27bdp@chr3:55178388..55178399, -
7.3e-14FFCP PHASE1:Hg19::chr3:55178388..55178399,-#_4ac02023fdcce11b8169886cb94a27bdp@chr3:55178388..55178399, -
7.3e-14FFCP PHASE2:Hg19::chr11:102712990..102713003,-#_4ac02023fdcce11b8169886cb94a27bdp@chr11:102712990..102713003, -
8.28e-14FFCP PHASE2:Hg19::chr6:31304866..31304870,-#_b43f5c866997ebe84b71d0d02d43eb64p@chr6:31304866..31304870, -
8.28e-14FFCP PHASE1:Hg19::chr6:31304866..31304870,-#_b43f5c866997ebe84b71d0d02d43eb64p@chr6:31304866..31304870, -
9.4e-14FFCP PHASE2:Hg19::chr1:45087872..45087892,+#_604f0f2826ea9e7bc8e6c3dfe587a142p@chr1:45087872..45087892, +
9.4e-14FFCP PHASE1:Hg19::chr1:45087872..45087892,+#_604f0f2826ea9e7bc8e6c3dfe587a142p@chr1:45087872..45087892, +
9.74e-14FFCP PHASE2:Hg19::chr8:27528869..27528882,+#_b00b5552b98ac20f47044573be36de71p@chr8:27528869..27528882, +
9.74e-14FFCP PHASE1:Hg19::chr8:27528869..27528882,+#_b00b5552b98ac20f47044573be36de71p@chr8:27528869..27528882, +

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