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{{CL
{{CL
|id=CL:0002584
|alt_id=
|name=renal cortical epithelial cell
|namespace=cell
|def="An epithelial cell of the kidney cortex." [GOC:tfm]
|xref=KUPO:0001016
|is_a=CL:0002518;;CL:0002681
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An epithelial cell of the kidney cortex." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002584
|is_a=CL:0002518 ;;CL:0002681
|is_obsolete=
|located_in=
|located_in=
|name=renal cortical epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001225
|part_of=UBERON:0001225
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=KUPO:0001016
}}
}}

Latest revision as of 16:45, 12 September 2014

Name:renal cortical epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell of the kidney cortex." [GOC:tfm]
Xrefs:
links:
KUPO:0001016


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002518(kidney epithelial cell),CL:0002681(kidney cortical cell)
part_of:UBERON:0001225(cortex of kidney)



Children


is a:CL:1000612 (kidney corpuscule cell),CL:1000615 (kidney cortex tubule cell)
derives from:FF:0000152 (human renal cortical epithelial cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002584 (renal cortical epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.8e-58FFCP PHASE1:Hg19::chr2:693380..693398,+#_48391457440185be8591682be6813397p@chr2:693380..693398, +
4.8e-58FFCP PHASE2:Hg19::chr2:693380..693398,+#_48391457440185be8591682be6813397p@chr2:693380..693398, +
4.05e-52FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_130dfebdd1ad5083503b58c4d9d0589dp7@HOXA10
4.05e-52FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_130dfebdd1ad5083503b58c4d9d0589dp7@HOXA10
1.06e-50FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_f4a9ae2b9f391fbed538561481135d75p@chr5:74244100..74244117, +
1.06e-50FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_f4a9ae2b9f391fbed538561481135d75p@chr5:74244100..74244117, +
5.59e-50FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_8c0370856c4b36ec09831290d18c143ap2@PLA2G2F
5.59e-50FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_8c0370856c4b36ec09831290d18c143ap2@PLA2G2F
6.11e-42FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_b9ac9002e2bc4f0f94b466c338ad3366p@chr16:86768403..86768437, +
6.11e-42FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_b9ac9002e2bc4f0f94b466c338ad3366p@chr16:86768403..86768437, +
3.58e-41FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_6b8568bda6988f56446c09a03b63f120p4@MEGF11
3.58e-41FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_6b8568bda6988f56446c09a03b63f120p4@MEGF11
1.0e-40FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_75ccd819eb972aa034092601ef6fd832p1@ENST00000413103
1.0e-40FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_75ccd819eb972aa034092601ef6fd832p1@ENST00000413103
6.83e-40FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_d599e975d00bc8e32acbf27579c68fb6p@chr7:140227303..140227330, -
6.83e-40FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_d599e975d00bc8e32acbf27579c68fb6p@chr7:140227303..140227330, -
9.22e-40FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e166f956b6567073de90be7e7edb3330p3@PAX2
9.22e-40FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e166f956b6567073de90be7e7edb3330p3@PAX2
1.79e-39FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_1f5fa89a8f31d23ff8a92bd2bde6159cp@chr18:3456189..3456200, +
1.79e-39FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_1f5fa89a8f31d23ff8a92bd2bde6159cp@chr18:3456189..3456200, +
4.5e-38FFCP PHASE2:Hg19::chr6:30890456..30890482,+#_dbfa2c3626e7f77dc9c86599d9c482cep11@VARS2
4.5e-38FFCP PHASE1:Hg19::chr6:30890456..30890482,+#_dbfa2c3626e7f77dc9c86599d9c482cep11@VARS2
8.61e-38FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_e6a402695dcdb233535ca88a5aaa7180p@chr2:120409486..120409492, +
8.61e-38FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_e6a402695dcdb233535ca88a5aaa7180p@chr2:120409486..120409492, +
5.07e-37FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_b8c8ec6300245ff20b223fff77d62c21p2@AB527789
5.07e-37FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_b8c8ec6300245ff20b223fff77d62c21p2@AB527789
6.37e-37FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_65fe871adc78fc42b97cf78a160c0441p@chr1:1100457..1100470, +
6.37e-37FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_65fe871adc78fc42b97cf78a160c0441p@chr1:1100457..1100470, +
1.63e-36FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_42d383e426435976d5a1462340127c20p6@LRRN4
1.63e-36FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_42d383e426435976d5a1462340127c20p6@LRRN4
2.81e-35FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_d78570ea5abc2a80931ad63c13533c08p3@HNF1B
2.81e-35FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_d78570ea5abc2a80931ad63c13533c08p3@HNF1B
4.37e-35FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_8fe086e110db708cbf5fea081decd4b1p4@AIF1L
4.37e-35FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_8fe086e110db708cbf5fea081decd4b1p4@AIF1L
1.19e-34FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_690f2bb0ee2880dd6e2292666812574fp4@PAX2
1.19e-34FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_690f2bb0ee2880dd6e2292666812574fp4@PAX2
5.98e-34FFCP PHASE1:Hg19::chr5:167718782..167718785,+#_e9ca4d668c89e5de0ad78a5132ad120fp10@WWC1
5.98e-34FFCP PHASE2:Hg19::chr5:167718782..167718785,+#_e9ca4d668c89e5de0ad78a5132ad120fp10@WWC1
2.93e-33FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_245267bd3cc1c7d44236caf2c5263ca5p2@LRRN4
2.93e-33FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_245267bd3cc1c7d44236caf2c5263ca5p2@LRRN4
1.44e-32FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_00b5e163d624797b7be325904fda6e90p2@CLDN6
1.44e-32FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_00b5e163d624797b7be325904fda6e90p2@CLDN6
1.85e-32FFCP PHASE2:Hg19::chr20:6034828..6034857,-#_86cb2aef8bd2bdf55579a7e9776cab47p5@LRRN4
1.85e-32FFCP PHASE1:Hg19::chr20:6034828..6034857,-#_86cb2aef8bd2bdf55579a7e9776cab47p5@LRRN4
4.69e-32FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_3a3ad25991e13d529ada8a7d22209277p@chr7:140227349..140227360, -
4.69e-32FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_3a3ad25991e13d529ada8a7d22209277p@chr7:140227349..140227360, -
1.23e-31FFCP PHASE2:Hg19::chr17:27970385..27970397,-#_b7db36517be2276146ca7ad74f4da440p@chr17:27970385..27970397, -
1.23e-31FFCP PHASE1:Hg19::chr17:27970385..27970397,-#_b7db36517be2276146ca7ad74f4da440p@chr17:27970385..27970397, -
2.99e-30FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_356fa3b394fbdafef8a5f48536ecd0dbp@chr15:85403302..85403304, +
2.99e-30FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_356fa3b394fbdafef8a5f48536ecd0dbp@chr15:85403302..85403304, +
3.02e-30FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_525f03d576f5daaab803b1c8fb249cb1p2@B3GALT5
3.02e-30FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_525f03d576f5daaab803b1c8fb249cb1p2@B3GALT5
1.06e-29FFCP PHASE2:Hg19::chr19:50390837..50390847,+#_3dba0353a720ee2f7d96e25381a9a005p@chr19:50390837..50390847, +
1.06e-29FFCP PHASE1:Hg19::chr19:50390837..50390847,+#_3dba0353a720ee2f7d96e25381a9a005p@chr19:50390837..50390847, +
1.26e-29FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_dc4540f13fa046fd1e2f429ab668d990p3@LRRN4
1.26e-29FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_dc4540f13fa046fd1e2f429ab668d990p3@LRRN4
1.54e-29FFCP PHASE2:Hg19::chr17:171147..171161,+#_924df319e44f017315698121d339fa81p@chr17:171147..171161, +
1.54e-29FFCP PHASE1:Hg19::chr17:171147..171161,+#_924df319e44f017315698121d339fa81p@chr17:171147..171161, +
3.11e-29FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_fa92e54006dfd8c9dd9f8c6cac3c27d4p@chr21:46826248..46826282, -
3.11e-29FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_fa92e54006dfd8c9dd9f8c6cac3c27d4p@chr21:46826248..46826282, -
4.34e-29FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_e267730f28b22692c79e56d984ede771p1@ENST00000418041, p1@ENST00000443104
4.34e-29FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_e267730f28b22692c79e56d984ede771p1@ENST00000418041, p1@ENST00000443104
1.58e-28FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_bcddc380e74ca6ab9131998818ac7b3fp3@AIF1L
1.58e-28FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_bcddc380e74ca6ab9131998818ac7b3fp3@AIF1L
2.94e-28FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_e77cd557899cbcc33830cbbcaab105afp@chr7:7606139..7606151, -
2.94e-28FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_e77cd557899cbcc33830cbbcaab105afp@chr7:7606139..7606151, -
6.08e-28FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_926868fed62ae478edc49a20b2d2448bp1@ENST00000444849
6.08e-28FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_926868fed62ae478edc49a20b2d2448bp1@ENST00000444849
1.11e-27FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_30aafb957b71e462fa1f0c8d5fc734adp2@PAX2
1.11e-27FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_30aafb957b71e462fa1f0c8d5fc734adp2@PAX2
2.09e-27FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_d4475b5c4e487f8a5e035ed16dbed908p16@TJP2
2.09e-27FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_d4475b5c4e487f8a5e035ed16dbed908p16@TJP2
2.35e-27FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_f6f7bb3aa35b530a035327f4deade547p@chr16:86604624..86604648, +
2.35e-27FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_f6f7bb3aa35b530a035327f4deade547p@chr16:86604624..86604648, +
3.45e-27FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_fa4b64139c52ac3c4f95f908624dcd3ap7@LRRN4
3.45e-27FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_fa4b64139c52ac3c4f95f908624dcd3ap7@LRRN4
7.25e-27FFCP PHASE1:Hg19::chr17:171082..171101,+#_17cf0dd3206541d9534063cf67fc9381p@chr17:171082..171101, +
7.25e-27FFCP PHASE2:Hg19::chr17:171082..171101,+#_17cf0dd3206541d9534063cf67fc9381p@chr17:171082..171101, +
4.96e-26FFCP PHASE2:Hg19::chr20:6033140..6033181,-#_4d0a791f3189e4bed57bb7d4bdeeab76p1@AB527789
4.96e-26FFCP PHASE1:Hg19::chr20:6033140..6033181,-#_4d0a791f3189e4bed57bb7d4bdeeab76p1@AB527789
7.1e-26FFCP PHASE2:Hg19::chr2:108994633..108994650,+#_365a0ae20ade498b0f2371e4e78fa27dp4@SULT1C4
7.1e-26FFCP PHASE1:Hg19::chr2:108994633..108994650,+#_365a0ae20ade498b0f2371e4e78fa27dp4@SULT1C4
9.68e-25FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_8aaf1b05179a9b29d595de8b641e9d62p4@DCDC2
9.68e-25FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_8aaf1b05179a9b29d595de8b641e9d62p4@DCDC2
1.6e-24FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_db758bd0fcea6abbff1ccf17646112a7p16@HOXA10
1.6e-24FFCP PHASE1:Hg19::chr2:177053683..177053697,-#_db758bd0fcea6abbff1ccf17646112a7p1@LOC401022
1.6e-24FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_db758bd0fcea6abbff1ccf17646112a7p16@HOXA10
1.6e-24FFCP PHASE2:Hg19::chr2:177053683..177053697,-#_db758bd0fcea6abbff1ccf17646112a7p1@LOC401022
1.66e-24FFCP PHASE2:Hg19::chr22:37823036..37823049,-#_4119f23676a202924aea91571542d1f4p1@ENST00000451509
1.66e-24FFCP PHASE1:Hg19::chr22:37823036..37823049,-#_4119f23676a202924aea91571542d1f4p1@ENST00000451509
1.87e-24FFCP PHASE2:Hg19::chr17:46675539..46675551,-#_60b3dff8976435c468f8e609635bac0bp7@HOXB6
1.87e-24FFCP PHASE1:Hg19::chr17:46675539..46675551,-#_60b3dff8976435c468f8e609635bac0bp7@HOXB6
2.63e-24FFCP PHASE2:Hg19::chr13:26619917..26619921,-#_06350f8d436e7ae3451f7bcb8192c209p@chr13:26619917..26619921, -
2.63e-24FFCP PHASE1:Hg19::chr13:26619917..26619921,-#_06350f8d436e7ae3451f7bcb8192c209p@chr13:26619917..26619921, -
2.91e-24FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_b4884e2e32408b59249e57b138d8aabcp1@HOXD4
2.91e-24FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_b4884e2e32408b59249e57b138d8aabcp1@HOXD4
2.98e-24FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_b36aad57702fb67e6d5b6f35eaaf8459p@chr7:98453821..98453843, -
2.98e-24FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_b36aad57702fb67e6d5b6f35eaaf8459p@chr7:98453821..98453843, -
3.49e-24FFCP PHASE2:Hg19::chr12:6485243..6485254,-#_1a12aab1ccb5572855d0f85befad75adp18@SCNN1A
3.49e-24FFCP PHASE1:Hg19::chr12:6485243..6485254,-#_1a12aab1ccb5572855d0f85befad75adp18@SCNN1A

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