DOID:1324: Difference between revisions
From FANTOM5_SSTAR
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|id=DOID:1324
|name=lung cancer
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|def="A respiratory system cancer that is located_in the lung." [url:http\://en.wikipedia.org/wiki/Lung_cancer]
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{{DOID | {{DOID | ||
| | |alt_id=DOID:13075;;DOID:1322;;DOID:9881 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A respiratory system cancer that is located_in the lung." [url:http://en.wikipedia.org/wiki/Lung_cancer] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:1324 | |||
|is_a=DOID:0050615 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lung cancer | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
|subset= | |||
|synonym= | |||
|union_of= | |||
|xref=ICD9CM:162.3;;SNOMEDCT_2010_1_31:187860004;;SNOMEDCT_2010_1_31:187863002;;SNOMEDCT_2010_1_31:187864008;;SNOMEDCT_2010_1_31:187867001;;SNOMEDCT_2010_1_31:187868006;;SNOMEDCT_2010_1_31:187871003;;SNOMEDCT_2010_1_31:187874006;;SNOMEDCT_2010_1_31:269464000;;UMLS_CUI:C0024624;;UMLS_CUI:C0153491;;UMLS_CUI:C0153492;;UMLS_CUI:C0153493 | |||
}} | }} |
Latest revision as of 16:48, 12 September 2014
Name: | lung cancer | ||
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Namespace: | FANTOM | ||
Definition: | "A respiratory system cancer that is located_in the lung." [url:http://en.wikipedia.org/wiki/Lung_cancer] | ||
Xrefs: |
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Alt_id: |
DOID:13075 DOID:1322 DOID:9881 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:0050615(respiratory system cancer) |
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Children
is a: | DOID:1325 (bronchus cancer),DOID:3905 (lung carcinoma) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
- 10486-107A9 (squamous cell lung carcinoma cell line:EBC-1)
- 10499-107C4 (lung adenocarcinoma cell line:A549)
- 10500-107C5
- 10501-107C6 (squamous cell lung carcinoma cell line:RERF-LC-AI)
- 10502-107C7
... further results Mouse (Mus musculus)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
- 10486-107A9 (squamous cell lung carcinoma cell line:EBC-1)
- 10499-107C4 (lung adenocarcinoma cell line:A549)
- 10500-107C5
- 10501-107C6 (squamous cell lung carcinoma cell line:RERF-LC-AI)
- 10502-107C7
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1324 (lung cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data