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DOID:1324: Difference between revisions

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{{DOID
{{DOID
|id=DOID:1324
|alt_id=DOID:13075;;DOID:1322;;DOID:9881
|name=lung cancer
|namespace=
|def="A respiratory system cancer that is located_in the lung." [url:http\://en.wikipedia.org/wiki/Lung_cancer]
|xref=
|is_a=DOID:0050615
|synonym=
|comment=
|comment=
|alt_id=DOID:13075;;DOID:1322;;DOID:9881
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A respiratory system cancer that is located_in the lung." [url:http://en.wikipedia.org/wiki/Lung_cancer]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:1324
|is_a=DOID:0050615
|is_obsolete=
|located_in=
|located_in=
|name=lung cancer
|namespace=FANTOM
|obo_creation_date=
|part_of=
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
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|xref=ICD9CM:162.3;;SNOMEDCT_2010_1_31:187860004;;SNOMEDCT_2010_1_31:187863002;;SNOMEDCT_2010_1_31:187864008;;SNOMEDCT_2010_1_31:187867001;;SNOMEDCT_2010_1_31:187868006;;SNOMEDCT_2010_1_31:187871003;;SNOMEDCT_2010_1_31:187874006;;SNOMEDCT_2010_1_31:269464000;;UMLS_CUI:C0024624;;UMLS_CUI:C0153491;;UMLS_CUI:C0153492;;UMLS_CUI:C0153493
}}
}}

Latest revision as of 16:48, 12 September 2014

Name:lung cancer
Namespace:FANTOM
Definition:"A respiratory system cancer that is located_in the lung." [url:http://en.wikipedia.org/wiki/Lung_cancer]
Xrefs:
links:

ICD9CM:162.3
SNOMEDCT_2010_1_31:187860004
SNOMEDCT_2010_1_31:187863002
SNOMEDCT_2010_1_31:187864008
SNOMEDCT_2010_1_31:187867001
SNOMEDCT_2010_1_31:187868006
SNOMEDCT_2010_1_31:187871003
SNOMEDCT_2010_1_31:187874006
SNOMEDCT_2010_1_31:269464000
UMLS_CUI:C0024624
UMLS_CUI:C0153491
UMLS_CUI:C0153492

UMLS_CUI:C0153493
Alt_id: DOID:13075
DOID:1322
DOID:9881

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:0050615(respiratory system cancer)



Children


is a:DOID:1325 (bronchus cancer),DOID:3905 (lung carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1324 (lung cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data