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{{DOID
{{DOID
|id=DOID:225
|alt_id=
|name=syndrome
|namespace=disease_ontology
|def="A disease comprised of a group of signs and symptoms that occur together and characterize a particular abnormality." [URL:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book=Medical&va=syndrome]
|xref=MSH:D013577;;NCI:C28193;;SNOMEDCT_2010_1_31:64572001;;UMLS_CUI:C0039082
|is_a=DOID:4
|synonym="syndrome" EXACT [MTH:NOCODE];;"syndrome, NOS" EXACT [SNOMEDCT_2005_07_31:64572001]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A disease comprised of a group of signs and symptoms that occur together and characterize a particular abnormality." [URL:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:225
|is_a=DOID:4
|is_obsolete=
|located_in=
|located_in=
|name=syndrome
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="syndrome" EXACT [MTH:NOCODE];;"syndrome, NOS" EXACT [SNOMEDCT_2005_07_31:64572001]
|union_of=
|xref=MSH:D013577;;NCI:C28193;;SNOMEDCT_2010_1_31:64572001;;UMLS_CUI:C0039082
}}
}}

Latest revision as of 16:49, 12 September 2014

Name:syndrome
Namespace:FANTOM
Definition:"A disease comprised of a group of signs and symptoms that occur together and characterize a particular abnormality." [URL:http://www2.merriam-webster.com/cgi-bin/mwmednlm?book
Xrefs:
links:

MSH:D013577
NCI:C28193
SNOMEDCT_2010_1_31:64572001

UMLS_CUI:C0039082
Synonyms: "syndrome" EXACT [MTH:NOCODE]
"syndrome, NOS" EXACT [SNOMEDCT_2005_07_31:64572001]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:4(disease)



Children


is a:FF:10772-110F7 (myelodysplastic syndrome cell line:SKM-1)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:225 (syndrome), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data