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DOID:299: Difference between revisions

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{{DOID
{{DOID
|id=DOID:299
|alt_id=
|name=adenocarcinoma
|namespace=disease_ontology
|def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http\://en.wikipedia.org/wiki/Adenocarcinoma]
|xref=MSH:D000230;;NCI:C2852;;SNOMEDCT_2010_1_31:189578007;;SNOMEDCT_2010_1_31:189582009;;SNOMEDCT_2010_1_31:35917007;;SNOMEDCT_2010_1_31:443961001;;UMLS_CUI:C0001418
|is_a=DOID:305
|synonym="adenocarcinoma" EXACT [NCI2004_11_17:C2852];;"adenocarcinoma" EXACT [CSP2005:2000-0386];;"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009];;"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007];;"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http://en.wikipedia.org/wiki/Adenocarcinoma]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:299
|is_a=DOID:305
|is_obsolete=
|located_in=
|located_in=
|name=adenocarcinoma
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="adenocarcinoma" EXACT [NCI2004_11_17:C2852];;"adenocarcinoma" EXACT [CSP2005:2000-0386];;"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009];;"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007];;"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007]
|union_of=
|xref=MSH:D000230;;NCI:C2852;;SNOMEDCT_2010_1_31:189578007;;SNOMEDCT_2010_1_31:189582009;;SNOMEDCT_2010_1_31:35917007;;SNOMEDCT_2010_1_31:443961001;;UMLS_CUI:C0001418
}}
}}

Latest revision as of 16:50, 12 September 2014

Name:adenocarcinoma
Namespace:FANTOM
Definition:"A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http://en.wikipedia.org/wiki/Adenocarcinoma]
Xrefs:
links:

MSH:D000230
NCI:C2852
SNOMEDCT_2010_1_31:189578007
SNOMEDCT_2010_1_31:189582009
SNOMEDCT_2010_1_31:35917007
SNOMEDCT_2010_1_31:443961001

UMLS_CUI:C0001418
Synonyms: "adenocarcinoma" EXACT [NCI2004_11_17:C2852]
"adenocarcinoma" EXACT [CSP2005:2000-0386]
"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009]
"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007]
"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:305(carcinoma)



Children


is a:DOID:3030 (mucinous adenocarcinoma),DOID:3111 (cystadenocarcinoma),DOID:3112 (papillary adenocarcinoma),DOID:3493 (signet ring cell adenocarcinoma),DOID:4468 (clear cell adenocarcinoma),DOID:4929 (tubular adenocarcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:299 (adenocarcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data