DOID:299: Difference between revisions
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| | |def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http://en.wikipedia.org/wiki/Adenocarcinoma] | ||
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|id=DOID:299 | |||
|is_a=DOID:305 | |||
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|name=adenocarcinoma | |||
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
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|synonym="adenocarcinoma" EXACT [NCI2004_11_17:C2852];;"adenocarcinoma" EXACT [CSP2005:2000-0386];;"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009];;"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007];;"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007] | |||
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|xref=MSH:D000230;;NCI:C2852;;SNOMEDCT_2010_1_31:189578007;;SNOMEDCT_2010_1_31:189582009;;SNOMEDCT_2010_1_31:35917007;;SNOMEDCT_2010_1_31:443961001;;UMLS_CUI:C0001418 | |||
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Latest revision as of 16:50, 12 September 2014
Name: | adenocarcinoma | |
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Namespace: | FANTOM | |
Definition: | "A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http://en.wikipedia.org/wiki/Adenocarcinoma] | |
Xrefs: |
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Synonyms: |
"adenocarcinoma" EXACT [NCI2004_11_17:C2852] "adenocarcinoma" EXACT [CSP2005:2000-0386] "adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009] "adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007] "adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:305(carcinoma) |
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Children
is a: | DOID:3030 (mucinous adenocarcinoma),DOID:3111 (cystadenocarcinoma),DOID:3112 (papillary adenocarcinoma),DOID:3493 (signet ring cell adenocarcinoma),DOID:4468 (clear cell adenocarcinoma),DOID:4929 (tubular adenocarcinoma) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10437-106E5 (papillary adenocarcinoma cell line:8505C)
- 10472-106I4
- 10482-107A5 (breast carcinoma cell line:MCF7)
- 10483-107A6 (signet ring carcinoma cell line:NUGC-4)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10500-107C5
... further results Mouse (Mus musculus)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10437-106E5 (papillary adenocarcinoma cell line:8505C)
- 10472-106I4
- 10482-107A5 (breast carcinoma cell line:MCF7)
- 10483-107A6 (signet ring carcinoma cell line:NUGC-4)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10500-107C5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:299 (adenocarcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data