Personal tools

DOID:3620: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{DOID
{{DOID
|id=DOID:3620
|alt_id=DOID:0060093;;DOID:1318
|name=central nervous system cancer
|namespace=disease_ontology
|def="A nervous system cancer that is located_in the central nervous system." [url:http://en.wikipedia.org/wiki/Central_nervous_system]
|xref=MSH:D016543;;NCI:C9293;;SNOMEDCT_2010_1_31:126951006;;SNOMEDCT_2010_1_31:190135002;;SNOMEDCT_2010_1_31:372062007;;SNOMEDCT_2010_1_31:93744007;;UMLS_CUI:C0085136;;UMLS_CUI:C0348374
|is_a=DOID:3093
|synonym="central nervous system cancer" EXACT [];;"central nervous system tumor" EXACT [];;"central nervous system tumors" EXACT [NCI2004_11_17:C9293];;"CNS neoplasm" EXACT [CSP2005:2012-5421];;"malignant neoplasm of central nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:372062007];;"malignant neoplasm of central nervous system NOS" EXACT [MTHICD9_2006:192.9];;"malignant neoplasm of central nervous system, NOS" EXACT [SNOMEDCT_2005_07_31:93744007];;"malignant neoplasm of central nervous system, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190135002];;"malignant tumor of CNS" EXACT [NCI2004_11_17:C4627];;"neoplasm of central nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:126951006]
|comment=
|comment=
|alt_id=DOID:0060093;;DOID:1318
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A nervous system cancer that is located_in the central nervous system." [url:http://en.wikipedia.org/wiki/Central_nervous_system]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:3620
|is_a=DOID:3093
|is_obsolete=
|located_in=
|located_in=
|name=central nervous system cancer
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="central nervous system cancer" EXACT [];;"central nervous system tumor" EXACT [];;"central nervous system tumors" EXACT [NCI2004_11_17:C9293];;"CNS neoplasm" EXACT [CSP2005:2012-5421];;"malignant neoplasm of central nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:372062007];;"malignant neoplasm of central nervous system NOS" EXACT [MTHICD9_2006:192.9];;"malignant neoplasm of central nervous system, NOS" EXACT [SNOMEDCT_2005_07_31:93744007];;"malignant neoplasm of central nervous system, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190135002];;"malignant tumor of CNS" EXACT [NCI2004_11_17:C4627];;"neoplasm of central nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:126951006]
|union_of=
|xref=MSH:D016543;;NCI:C9293;;SNOMEDCT_2010_1_31:126951006;;SNOMEDCT_2010_1_31:190135002;;SNOMEDCT_2010_1_31:372062007;;SNOMEDCT_2010_1_31:93744007;;UMLS_CUI:C0085136;;UMLS_CUI:C0348374
}}
}}

Latest revision as of 16:51, 12 September 2014

Name:central nervous system cancer
Namespace:FANTOM
Definition:"A nervous system cancer that is located_in the central nervous system." [url:http://en.wikipedia.org/wiki/Central_nervous_system]
Xrefs:
links:

MSH:D016543
NCI:C9293
SNOMEDCT_2010_1_31:126951006
SNOMEDCT_2010_1_31:190135002
SNOMEDCT_2010_1_31:372062007
SNOMEDCT_2010_1_31:93744007
UMLS_CUI:C0085136

UMLS_CUI:C0348374
Synonyms: "central nervous system cancer" EXACT []
"central nervous system tumor" EXACT []
"central nervous system tumors" EXACT [NCI2004_11_17:C9293]
"CNS neoplasm" EXACT [CSP2005:2012-5421]
"malignant neoplasm of central nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:372062007]
"malignant neoplasm of central nervous system NOS" EXACT [MTHICD9_2006:192.9]
"malignant neoplasm of central nervous system, NOS" EXACT [SNOMEDCT_2005_07_31:93744007]
"malignant neoplasm of central nervous system, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190135002]
"malignant tumor of CNS" EXACT [NCI2004_11_17:C4627]
"neoplasm of central nervous system (disorder)" EXACT [SNOMEDCT_2005_07_31:126951006]
Alt_id: DOID:0060093
DOID:1318

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:3093(nervous system cancer)



Children


is a:DOID:1319 (brain cancer),DOID:3565 (meningioma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3620 (central nervous system cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data