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|located_in=
|located_in=
|name=bone marrow cancer
|name=bone marrow cancer
|namespace=disease_ontology
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:51, 12 September 2014

Name:bone marrow cancer
Namespace:FANTOM
Definition:"A hematopoietic cancer that derives_from the blood-forming stem cells of the bone marrow." [url:http://nci.nih.gov/dictionary/?CdrID
Xrefs:
links:

MSH:D009196
SNOMEDCT_2010_1_31:128925001
SNOMEDCT_2010_1_31:188772004
SNOMEDCT_2010_1_31:20921005
SNOMEDCT_2010_1_31:414792005
SNOMEDCT_2010_1_31:414794006
SNOMEDCT_2010_1_31:425333006

UMLS_CUI:C0027022
Synonyms: "bone marrow neoplasm" EXACT [CSP2005:2004-0492]
"bone Marrow tumor" EXACT [NCI2004_11_17:C35370]
"malignant bone Marrow tumor" EXACT [NCI2004_11_17:C35501]
"malignant neoplasm of bone marrow" EXACT []
"Myeloid neoplasm (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:414792005]
"myeloproliferative disease" EXACT []
"Myeloproliferative disease NOS" EXACT [MTHICD9_2006:238.7]
"Myeloproliferative disease, no ICD-O subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:128925001]
"Myeloproliferative disease, NOS" EXACT [SNOMEDCT_2005_07_31:20921005]
"Myeloproliferative disorder" EXACT [SNOMEDCT_2005_07_31:188772004]
"Myeloproliferative disorder (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:414794006]
"myeloproliferative neoplasm" EXACT [CSP2005:2004-0893]
"Myeloproliferative tumors" EXACT [NCI2004_11_17:C9290]
"neoplasm of bone marrow (disorder)" EXACT [SNOMEDCT_2005_07_31:414824005]
"primary malignant neoplasm of bone marrow (disorder)" EXACT [SNOMEDCT_2005_07_31:93720005]
Alt_id: DOID:2356
DOID:2761

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:2531(hematologic cancer)



Children


is a:DOID:0070004 (myeloma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4960 (bone marrow cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr5:10801244..10801250,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr5:10801244..10801250, +
5.42e-195FFCP PHASE2:Hg19::chr12:109077960..109077962,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr12:109077960..109077962, -
5.42e-195FFCP PHASE1:Hg19::chr2:144992180..144992184,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr2:144992180..144992184, +
5.42e-195FFCP PHASE1:Hg19::chr16:79747801..79747810,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79747801..79747810, +
5.42e-195FFCP PHASE1:Hg19::chr8:62747349..62747356,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp2@ENST00000517953
5.42e-195FFCP PHASE2:Hg19::chr16:79608731..79608732,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79608731..79608732, -
5.42e-195FFCP PHASE1:Hg19::chr8:116599856..116599857,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:116599856..116599857, -
5.42e-195FFCP PHASE1:Hg19::chr12:68862998..68863016,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr12:68862998..68863016, -
5.42e-195FFCP PHASE2:Hg19::chr4:66306454..66306463,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:66306454..66306463, +
5.42e-195FFCP PHASE1:Hg19::chr4:76525013..76525031,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:76525013..76525031, -
5.42e-195FFCP PHASE2:Hg19::chr7:81432906..81432917,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432906..81432917, -
5.42e-195FFCP PHASE1:Hg19::chr4:66233218..66233227,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:66233218..66233227, -
5.42e-195FFCP PHASE2:Hg19::chr21:34488410..34488418,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr21:34488410..34488418, -
5.42e-195FFCP PHASE1:Hg19::chr6:389797..389804,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr6:389797..389804, -
5.42e-195FFCP PHASE1:Hg19::chr8:144610164..144610167,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:144610164..144610167, +
5.42e-195FFCP PHASE2:Hg19::chr8:48947511..48947526,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:48947511..48947526, +
5.42e-195FFCP PHASE2:Hg19::chr7:81501187..81501225,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81501187..81501225, +
5.42e-195FFCP PHASE2:Hg19::chr8:116599724..116599735,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:116599724..116599735, -
5.42e-195FFCP PHASE2:Hg19::chr16:79622919..79622925,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79622919..79622925, +
5.42e-195FFCP PHASE2:Hg19::chr8:1920058..1920066,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:1920058..1920066, +
5.42e-195FFCP PHASE1:Hg19::chr12:109077960..109077962,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr12:109077960..109077962, -
5.42e-195FFCP PHASE1:Hg19::chr8:108972941..108972947,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:108972941..108972947, -
5.42e-195FFCP PHASE1:Hg19::chr16:79619926..79619964,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79619926..79619964, -
5.42e-195FFCP PHASE2:Hg19::chr3:42237516..42237521,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr3:42237516..42237521, -
5.42e-195FFCP PHASE1:Hg19::chr7:81432964..81432970,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432964..81432970, -
5.42e-195FFCP PHASE1:Hg19::chr1:98039634..98039638,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr1:98039634..98039638, -
5.42e-195FFCP PHASE2:Hg19::chr7:85406211..85406217,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:85406211..85406217, +
5.42e-195FFCP PHASE2:Hg19::chr12:109077992..109078007,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr12:109077992..109078007, -
5.42e-195FFCP PHASE1:Hg19::chr2:144998671..144998676,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr2:144998671..144998676, -
5.42e-195FFCP PHASE2:Hg19::chr2:165615049..165615056,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr2:165615049..165615056, -
5.42e-195FFCP PHASE1:Hg19::chr5:10801166..10801179,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr5:10801166..10801179, +
5.42e-195FFCP PHASE2:Hg19::chr4:66308007..66308019,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:66308007..66308019, +
5.42e-195FFCP PHASE2:Hg19::chr7:81432923..81432934,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432923..81432934, -
5.42e-195FFCP PHASE1:Hg19::chr4:66305202..66305228,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:66305202..66305228, +
5.42e-195FFCP PHASE1:Hg19::chr22:17094735..17094738,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr22:17094735..17094738, +
5.42e-195FFCP PHASE1:Hg19::chr9:130691048..130691049,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp14@PIP5KL1
5.42e-195FFCP PHASE2:Hg19::chr9:22033489..22033492,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr9:22033489..22033492, +
5.42e-195FFCP PHASE2:Hg19::chr16:79747772..79747775,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79747772..79747775, +
5.42e-195FFCP PHASE1:Hg19::chr8:135513449..135513453,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:135513449..135513453, +
5.42e-195FFCP PHASE2:Hg19::chr8:48947527..48947530,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:48947527..48947530, +
5.42e-195FFCP PHASE1:Hg19::chr3:103710821..103710827,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr3:103710821..103710827, +
5.42e-195FFCP PHASE2:Hg19::chr8:116599752..116599766,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:116599752..116599766, -
5.42e-195FFCP PHASE2:Hg19::chr16:79626038..79626040,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79626038..79626040, -
5.42e-195FFCP PHASE1:Hg19::chr16:79747712..79747717,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79747712..79747717, +
5.42e-195FFCP PHASE2:Hg19::chr7:135679523..135679530,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:135679523..135679530, +
5.42e-195FFCP PHASE2:Hg19::chr4:76524891..76524896,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:76524891..76524896, -
5.42e-195FFCP PHASE1:Hg19::chr12:109077992..109078007,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr12:109077992..109078007, -
5.42e-195FFCP PHASE2:Hg19::chr2:144992180..144992184,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr2:144992180..144992184, +
5.42e-195FFCP PHASE1:Hg19::chr16:79622153..79622168,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79622153..79622168, -
5.42e-195FFCP PHASE1:Hg19::chr7:81432972..81432980,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432972..81432980, -
5.42e-195FFCP PHASE2:Hg19::chr8:62747349..62747356,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp2@ENST00000517953
5.42e-195FFCP PHASE2:Hg19::chr16:82817605..82817639,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:82817605..82817639, -
5.42e-195FFCP PHASE2:Hg19::chr7:85411224..85411232,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:85411224..85411232, -
5.42e-195FFCP PHASE2:Hg19::chr10:54886601..54886610,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr10:54886601..54886610, +
5.42e-195FFCP PHASE2:Hg19::chr3:15531393..15531399,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr3:15531393..15531399, -
5.42e-195FFCP PHASE1:Hg19::chr5:10801244..10801250,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr5:10801244..10801250, +
5.42e-195FFCP PHASE2:Hg19::chr6:389797..389804,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr6:389797..389804, -
5.42e-195FFCP PHASE2:Hg19::chr8:108972923..108972934,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:108972923..108972934, -
5.42e-195FFCP PHASE2:Hg19::chr16:79616145..79616150,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79616145..79616150, +
5.42e-195FFCP PHASE2:Hg19::chr8:144610164..144610167,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:144610164..144610167, +
5.42e-195FFCP PHASE2:Hg19::chr7:81432944..81432949,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432944..81432949, -
5.42e-195FFCP PHASE1:Hg19::chr16:79608731..79608732,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79608731..79608732, -
5.42e-195FFCP PHASE1:Hg19::chr4:66306454..66306463,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:66306454..66306463, +
5.42e-195FFCP PHASE1:Hg19::chr7:81432906..81432917,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432906..81432917, -
5.42e-195FFCP PHASE1:Hg19::chr10:54886601..54886610,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr10:54886601..54886610, +
5.42e-195FFCP PHASE2:Hg19::chr16:79747801..79747810,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79747801..79747810, +
5.42e-195FFCP PHASE2:Hg19::chr8:116599856..116599857,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:116599856..116599857, -
5.42e-195FFCP PHASE2:Hg19::chr4:76525013..76525031,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:76525013..76525031, -
5.42e-195FFCP PHASE1:Hg19::chr7:81501187..81501225,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81501187..81501225, +
5.42e-195FFCP PHASE2:Hg19::chr2:144998671..144998676,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr2:144998671..144998676, -
5.42e-195FFCP PHASE1:Hg19::chr8:116599724..116599735,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:116599724..116599735, -
5.42e-195FFCP PHASE1:Hg19::chr16:79622919..79622925,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79622919..79622925, +
5.42e-195FFCP PHASE2:Hg19::chr4:66233218..66233227,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:66233218..66233227, -
5.42e-195FFCP PHASE1:Hg19::chr3:42237516..42237521,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr3:42237516..42237521, -
5.42e-195FFCP PHASE2:Hg19::chr12:68862998..68863016,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr12:68862998..68863016, -
5.42e-195FFCP PHASE2:Hg19::chr22:17094735..17094738,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr22:17094735..17094738, +
5.42e-195FFCP PHASE1:Hg19::chr7:85406211..85406217,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:85406211..85406217, +
5.42e-195FFCP PHASE2:Hg19::chr9:130691048..130691049,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp14@PIP5KL1
5.42e-195FFCP PHASE2:Hg19::chr8:108972941..108972947,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:108972941..108972947, -
5.42e-195FFCP PHASE2:Hg19::chr16:79619926..79619964,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79619926..79619964, -
5.42e-195FFCP PHASE1:Hg19::chr21:34488410..34488418,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr21:34488410..34488418, -
5.42e-195FFCP PHASE2:Hg19::chr7:81432964..81432970,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432964..81432970, -
5.42e-195FFCP PHASE2:Hg19::chr1:98039634..98039638,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr1:98039634..98039638, -
5.42e-195FFCP PHASE1:Hg19::chr4:66308007..66308019,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:66308007..66308019, +
5.42e-195FFCP PHASE1:Hg19::chr8:48947511..48947526,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:48947511..48947526, +
5.42e-195FFCP PHASE1:Hg19::chr7:81432923..81432934,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432923..81432934, -
5.42e-195FFCP PHASE1:Hg19::chr8:1920058..1920066,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:1920058..1920066, +
5.42e-195FFCP PHASE2:Hg19::chr5:10801166..10801179,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr5:10801166..10801179, +
5.42e-195FFCP PHASE1:Hg19::chr16:79747772..79747775,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79747772..79747775, +
5.42e-195FFCP PHASE1:Hg19::chr8:116599752..116599766,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:116599752..116599766, -
5.42e-195FFCP PHASE1:Hg19::chr16:79626038..79626040,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79626038..79626040, -
5.42e-195FFCP PHASE1:Hg19::chr7:135679523..135679530,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:135679523..135679530, +
5.42e-195FFCP PHASE2:Hg19::chr4:66305202..66305228,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:66305202..66305228, +
5.42e-195FFCP PHASE1:Hg19::chr4:76524891..76524896,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr4:76524891..76524896, -
5.42e-195FFCP PHASE1:Hg19::chr2:165615049..165615056,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr2:165615049..165615056, -
5.42e-195FFCP PHASE2:Hg19::chr8:135513449..135513453,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr8:135513449..135513453, +
5.42e-195FFCP PHASE2:Hg19::chr3:103710821..103710827,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr3:103710821..103710827, +
5.42e-195FFCP PHASE2:Hg19::chr16:79747712..79747717,+#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:79747712..79747717, +
5.42e-195FFCP PHASE1:Hg19::chr16:82817605..82817639,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr16:82817605..82817639, -
5.42e-195FFCP PHASE2:Hg19::chr7:81432972..81432980,-#_343bae5aeb1ae6e0418104f1f3b0ac1dp@chr7:81432972..81432980, -

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