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{{DOID
{{DOID
|id=DOID:5861
|alt_id=
|name=myxoid chondrosarcoma
|namespace=disease_ontology
|def=
|xref=NCI:C4303;;SNOMEDCT_2010_1_31:189881008;;SNOMEDCT_2010_1_31:75622000;;UMLS_CUI:C0334551
|is_a=DOID:3371
|synonym=" Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189881008];;"Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:75622000]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
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|has_quality=
|id=DOID:5861
|is_a=DOID:3371
|is_obsolete=
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|name=myxoid chondrosarcoma
|namespace=FANTOM
|obo_creation_date=
|part_of=
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym=" Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189881008];;"Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:75622000]
|union_of=
|xref=NCI:C4303;;SNOMEDCT_2010_1_31:189881008;;SNOMEDCT_2010_1_31:75622000;;UMLS_CUI:C0334551
}}
}}

Latest revision as of 16:52, 12 September 2014

Name:myxoid chondrosarcoma
Namespace:FANTOM
Xrefs:
links:

NCI:C4303
SNOMEDCT_2010_1_31:189881008
SNOMEDCT_2010_1_31:75622000

UMLS_CUI:C0334551
Synonyms: " Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189881008]
"Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:75622000]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3371(chondrosarcoma)



Children


is a:DOID:6496 (extraskeletal myxoid chondrosarcoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Mouse (Mus musculus)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5861 (myxoid chondrosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr4:72885984..72885997,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:72885984..72885997, -
5.42e-195FFCP PHASE2:Hg19::chr3:2140149..2140157,+#_6ef67aad4781bdf0faef4ef7a3601b2fp25@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr1:228783266..228783269,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:228783266..228783269, -
5.42e-195FFCP PHASE2:Hg19::chr13:23733478..23733489,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23733478..23733489, -
5.42e-195FFCP PHASE1:Hg19::chr11:30257128..30257133,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr11:30257128..30257133, -
5.42e-195FFCP PHASE1:Hg19::chr3:1577586..1577600,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:1577586..1577600, -
5.42e-195FFCP PHASE2:Hg19::chr2:74780643..74780673,-#_6ef67aad4781bdf0faef4ef7a3601b2fp30@LOXL3
5.42e-195FFCP PHASE2:Hg19::chr11:30253410..30253431,+#_6ef67aad4781bdf0faef4ef7a3601b2fp2@FSHB
5.42e-195FFCP PHASE1:Hg19::chr15:96181433..96181441,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181433..96181441, -
5.42e-195FFCP PHASE1:Hg19::chr21:17357327..17357329,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr21:17357327..17357329, -
5.42e-195FFCP PHASE2:Hg19::chr3:157221979..157222025,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157221979..157222025, -
5.42e-195FFCP PHASE2:Hg19::chr17:46178195..46178202,-#_6ef67aad4781bdf0faef4ef7a3601b2fp12@CBX1
5.42e-195FFCP PHASE2:Hg19::chr14:88338702..88338713,-#_6ef67aad4781bdf0faef4ef7a3601b2fp1@ENST00000554305
5.42e-195FFCP PHASE1:Hg19::chrX:135338270..135338275,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338270..135338275, -
5.42e-195FFCP PHASE1:Hg19::chr6:152590257..152590288,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:152590257..152590288, -
5.42e-195FFCP PHASE1:Hg19::chr14:87689429..87689432,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr14:87689429..87689432, -
5.42e-195FFCP PHASE2:Hg19::chr6:150735340..150735361,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150735340..150735361, +
5.42e-195FFCP PHASE2:Hg19::chr7:18439523..18439524,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr7:18439523..18439524, +
5.42e-195FFCP PHASE2:Hg19::chr2:53436150..53436154,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:53436150..53436154, -
5.42e-195FFCP PHASE2:Hg19::chr21:38309134..38309135,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr21:38309134..38309135, -
5.42e-195FFCP PHASE1:Hg19::chr6:96913362..96913393,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:96913362..96913393, -
5.42e-195FFCP PHASE1:Hg19::chr5:39548606..39548614,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:39548606..39548614, -
5.42e-195FFCP PHASE2:Hg19::chr1:43637641..43637648,-#_6ef67aad4781bdf0faef4ef7a3601b2fp16@EBNA1BP2
5.42e-195FFCP PHASE1:Hg19::chr12:108955070..108955084,-#_6ef67aad4781bdf0faef4ef7a3601b2fp16@SART3
5.42e-195FFCP PHASE2:Hg19::chr1:172009977..172009985,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:172009977..172009985, +
5.42e-195FFCP PHASE1:Hg19::chr10:33244066..33244083,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:33244066..33244083, -
5.42e-195FFCP PHASE2:Hg19::chr12:108955070..108955084,-#_6ef67aad4781bdf0faef4ef7a3601b2fp16@SART3
5.42e-195FFCP PHASE1:Hg19::chr3:2141785..2141802,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141785..2141802, -
5.42e-195FFCP PHASE1:Hg19::chr12:79920639..79920642,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:79920639..79920642, -
5.42e-195FFCP PHASE2:Hg19::chr6:109702786..109702795,-#_6ef67aad4781bdf0faef4ef7a3601b2fp21@CD164
5.42e-195FFCP PHASE1:Hg19::chr12:70351971..70351975,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:70351971..70351975, +
5.42e-195FFCP PHASE2:Hg19::chr6:152589345..152589353,-#_6ef67aad4781bdf0faef4ef7a3601b2fp63@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr4:145101707..145101712,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:145101707..145101712, +
5.42e-195FFCP PHASE2:Hg19::chr18:74535888..74535894,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:74535888..74535894, -
5.42e-195FFCP PHASE2:Hg19::chr4:169935453..169935460,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:169935453..169935460, -
5.42e-195FFCP PHASE2:Hg19::chr3:170537826..170537835,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:170537826..170537835, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141851..2141858,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141851..2141858, -
5.42e-195FFCP PHASE2:Hg19::chr4:72897846..72897853,+#_6ef67aad4781bdf0faef4ef7a3601b2fp7@NPFFR2
5.42e-195FFCP PHASE2:Hg19::chr1:145473297..145473306,+#_6ef67aad4781bdf0faef4ef7a3601b2fp7@AB464458
5.42e-195FFCP PHASE1:Hg19::chr7:80080929..80080934,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr7:80080929..80080934, +
5.42e-195FFCP PHASE1:Hg19::chr2:27806224..27806236,+#_6ef67aad4781bdf0faef4ef7a3601b2fp5@ZNF512
5.42e-195FFCP PHASE1:Hg19::chr12:46660412..46660420,-#_6ef67aad4781bdf0faef4ef7a3601b2fp38@SLC38A1
5.42e-195FFCP PHASE1:Hg19::chr6:142993137..142993142,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:142993137..142993142, +
5.42e-195FFCP PHASE2:Hg19::chr4:145124273..145124279,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:145124273..145124279, +
5.42e-195FFCP PHASE2:Hg19::chr3:157231406..157231414,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157231406..157231414, -
5.42e-195FFCP PHASE2:Hg19::chr1:192444852..192444861,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192444852..192444861, +
5.42e-195FFCP PHASE2:Hg19::chr12:95941674..95941679,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:95941674..95941679, +
5.42e-195FFCP PHASE2:Hg19::chr12:46660412..46660420,-#_6ef67aad4781bdf0faef4ef7a3601b2fp38@SLC38A1
5.42e-195FFCP PHASE2:Hg19::chr6:142987388..142987398,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:142987388..142987398, -
5.42e-195FFCP PHASE2:Hg19::chr10:63700076..63700086,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:63700076..63700086, +
5.42e-195FFCP PHASE1:Hg19::chr5:128083909..128083918,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:128083909..128083918, +
5.42e-195FFCP PHASE1:Hg19::chr1:192408018..192408032,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192408018..192408032, -
5.42e-195FFCP PHASE2:Hg19::chr6:152792957..152792960,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:152792957..152792960, -
5.42e-195FFCP PHASE1:Hg19::chr4:169935485..169935488,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:169935485..169935488, -
5.42e-195FFCP PHASE1:Hg19::chr1:145473286..145473295,+#_6ef67aad4781bdf0faef4ef7a3601b2fp5@AB464458
5.42e-195FFCP PHASE2:Hg19::chr9:12848028..12848033,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:12848028..12848033, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141888..2141892,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141888..2141892, -
5.42e-195FFCP PHASE1:Hg19::chr12:80818234..80818245,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:80818234..80818245, +
5.42e-195FFCP PHASE2:Hg19::chr14:88282738..88282741,-#_6ef67aad4781bdf0faef4ef7a3601b2fp1@ENST00000554519
5.42e-195FFCP PHASE1:Hg19::chr6:152589396..152589401,-#_6ef67aad4781bdf0faef4ef7a3601b2fp68@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr3:196296715..196296737,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:196296715..196296737, -
5.42e-195FFCP PHASE2:Hg19::chr3:2141993..2142006,+#_6ef67aad4781bdf0faef4ef7a3601b2fp6@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr15:96181408..96181419,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181408..96181419, -
5.42e-195FFCP PHASE1:Hg19::chr12:70636933..70636940,+#_6ef67aad4781bdf0faef4ef7a3601b2fp28@CNOT2
5.42e-195FFCP PHASE2:Hg19::chr6:152590052..152590068,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:152590052..152590068, -
5.42e-195FFCP PHASE1:Hg19::chr8:107074411..107074421,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr8:107074411..107074421, +
5.42e-195FFCP PHASE1:Hg19::chr1:198595896..198595910,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:198595896..198595910, +
5.42e-195FFCP PHASE1:Hg19::chr1:112916133..112916138,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:112916133..112916138, -
5.42e-195FFCP PHASE2:Hg19::chr3:127441501..127441504,-#_6ef67aad4781bdf0faef4ef7a3601b2fp59@MGLL
5.42e-195FFCP PHASE2:Hg19::chr12:71031372..71031377,-#_6ef67aad4781bdf0faef4ef7a3601b2fp25@PTPRB
5.42e-195FFCP PHASE1:Hg19::chr12:71031325..71031332,-#_6ef67aad4781bdf0faef4ef7a3601b2fp19@PTPRB
5.42e-195FFCP PHASE2:Hg19::chr13:23027835..23027846,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23027835..23027846, +
5.42e-195FFCP PHASE1:Hg19::chr14:88322648..88322655,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr14:88322648..88322655, -
5.42e-195FFCP PHASE1:Hg19::chr20:36848135..36848142,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr20:36848135..36848142, -
5.42e-195FFCP PHASE2:Hg19::chr6:152589245..152589256,-#_6ef67aad4781bdf0faef4ef7a3601b2fp53@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr3:2141759..2141771,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141759..2141771, -
5.42e-195FFCP PHASE1:Hg19::chr9:13006722..13006729,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:13006722..13006729, -
5.42e-195FFCP PHASE1:Hg19::chr4:139817573..139817580,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:139817573..139817580, -
5.42e-195FFCP PHASE2:Hg19::chr5:33361438..33361453,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:33361438..33361453, -
5.42e-195FFCP PHASE2:Hg19::chr2:175629357..175629367,-#_6ef67aad4781bdf0faef4ef7a3601b2fp6@CHRNA1
5.42e-195FFCP PHASE1:Hg19::chr6:150735014..150735021,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150735014..150735021, -
5.42e-195FFCP PHASE2:Hg19::chr3:2140207..2140208,+#_6ef67aad4781bdf0faef4ef7a3601b2fp34@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr1:145471703..145471706,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:145471703..145471706, +
5.42e-195FFCP PHASE2:Hg19::chr13:23733607..23733611,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23733607..23733611, -
5.42e-195FFCP PHASE1:Hg19::chr7:79999046..79999051,+#_6ef67aad4781bdf0faef4ef7a3601b2fp41@CD36
5.42e-195FFCP PHASE1:Hg19::chr3:1577628..1577634,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:1577628..1577634, -
5.42e-195FFCP PHASE1:Hg19::chr1:197873492..197873502,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:197873492..197873502, -
5.42e-195FFCP PHASE2:Hg19::chr11:30257128..30257133,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr11:30257128..30257133, -
5.42e-195FFCP PHASE2:Hg19::chr3:157230506..157230511,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157230506..157230511, +
5.42e-195FFCP PHASE2:Hg19::chr1:192407879..192407891,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192407879..192407891, -
5.42e-195FFCP PHASE1:Hg19::chr7:18439468..18439477,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr7:18439468..18439477, +
5.42e-195FFCP PHASE1:Hg19::chrX:135338329..135338337,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338329..135338337, -
5.42e-195FFCP PHASE2:Hg19::chr6:150740842..150740854,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150740842..150740854, +
5.42e-195FFCP PHASE1:Hg19::chr3:157221979..157222025,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157221979..157222025, -
5.42e-195FFCP PHASE1:Hg19::chr17:46178195..46178202,-#_6ef67aad4781bdf0faef4ef7a3601b2fp12@CBX1
5.42e-195FFCP PHASE2:Hg19::chrX:135338397..135338402,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338397..135338402, -
5.42e-195FFCP PHASE1:Hg19::chr9:18504821..18504825,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:18504821..18504825, +
5.42e-195FFCP PHASE1:Hg19::chr3:2140149..2140157,+#_6ef67aad4781bdf0faef4ef7a3601b2fp25@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:228783266..228783269,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:228783266..228783269, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141813..2141822,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141813..2141822, -

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