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{{UBERON
{{UBERON
|id=UBERON:0000331
|alt_id=UBERON:BTO_0000619-FMA_14956
|name=ileal mucosa
|namespace=
|def="A mucosa that is part of a ileum [Obol]." [OBOL:automatic]
|xref=BTO:0000619;;FMA:14956;;SCTID:85458007
|is_a=UBERON:0000064;;UBERON:0001204
|synonym="Ileal mucous membrane" EXACT [FMA:14956];;"Ileum mucosa" EXACT [FMA:14956];;"ileum mucosa" EXACT [OBOL:automatic];;"ileum mucosa of organ" EXACT [OBOL:automatic];;"ileum mucous membrane" EXACT [OBOL:automatic];;"ileum organ mucosa" EXACT [OBOL:automatic];;"mucosa of ileum" EXACT [OBOL:automatic];;"mucosa of organ of ileum" EXACT [OBOL:automatic];;"mucous membrane of ileum" EXACT [OBOL:automatic];;"organ mucosa of ileum" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=UBERON:BTO_0000619-FMA_14956
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A mucosa that is part of a ileum [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0000331
|is_a=UBERON:0001204
|is_obsolete=
|located_in=
|located_in=
|name=ileal mucosa
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002116
|part_of=UBERON:0002116
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="Ileal mucous membrane" EXACT [FMA:14956];;"Ileum mucosa" EXACT [FMA:14956];;"ileum mucosa" EXACT [OBOL:automatic];;"ileum mucosa of organ" EXACT [OBOL:automatic];;"ileum mucous membrane" EXACT [OBOL:automatic];;"ileum organ mucosa" EXACT [OBOL:automatic];;"mucosa of ileum" EXACT [OBOL:automatic];;"mucosa of organ of ileum" EXACT [OBOL:automatic];;"mucous membrane of ileum" EXACT [OBOL:automatic];;"organ mucosa of ileum" EXACT [OBOL:automatic]
|union_of=
|xref=BTO:0000619;;FMA:14956;;SCTID:85458007
}}
}}

Latest revision as of 17:08, 12 September 2014

Name:ileal mucosa
Namespace:FANTOM
Definition:"A mucosa that is part of a ileum [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000619
FMA:14956

SCTID:85458007
Synonyms: "Ileal mucous membrane" EXACT [FMA:14956]
"Ileum mucosa" EXACT [FMA:14956]
"ileum mucosa" EXACT [OBOL:automatic]
"ileum mucosa of organ" EXACT [OBOL:automatic]
"ileum mucous membrane" EXACT [OBOL:automatic]
"ileum organ mucosa" EXACT [OBOL:automatic]
"mucosa of ileum" EXACT [OBOL:automatic]
"mucosa of organ of ileum" EXACT [OBOL:automatic]
"mucous membrane of ileum" EXACT [OBOL:automatic]
"organ mucosa of ileum" EXACT [OBOL:automatic]
Alt_id: UBERON:BTO_0000619-FMA_14956

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001204(mucosa of small intestine)
part_of:UBERON:0002116(ileum)



Children

is a:FF:0011477 (Ileum epithelium 1h after RANKL),FF:0011479 (Ileum epithelium 3h after RANKL)
part of:UBERON:0008344 (intestinal villus of ileum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000331 (ileal mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data