UBERON:0001638: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FMA_50723-MA_0000066-MA_0000067-MIAA_0000037-XAO_0000115-ZFA_0000082 | ||
|anatomical_img_id=FMA:50723 | |||
| | |||
|comment=TODO - check with MA - vein vs venous blood vessel | |comment=TODO - check with MA - vein vs venous blood vessel | ||
|created_by= | |created_by= | ||
| | |def="Any of the tubular branching vessels that carry blood from the capillaries toward the heart." [Wikipedia:Vein] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0001638 | |||
|is_a=UBERON:0003920 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=vein | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Part of the circulatory system composed of blood vessels which carry blood from other organs, tissues, and cells to the heart.[AAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Part of the circulatory system composed of blood vessels which carry blood from other organs, tissues, and cells to the heart.[AAO]" xsd:string | ||
| | |subset=uberon_slim;;vertebrate_core | ||
| | |synonym="vena" RELATED LATIN [Wikipedia:Vein];;"venous subtree" BROAD [];;"venous tree organ part" EXACT [];;"venous vessel" BROAD [] | ||
|union_of= | |||
|xref=AAO:0010212;;AEO:0000209;;BTO:0000234;;EFO:0000816;;EHDAA2:0003254;;EV:0100031;;FMA:50723;;GAID:492;;galen:Vein;;http://upload.wikimedia.org/wikipedia/commons/c/c2/Venous_system_en.svg;;http://upload.wikimedia.org/wikipedia/commons/thumb/c/c2/Venous_system_en.svg/200px-Venous_system_en.svg.png;;MA:0000067;;MAT:0000037;;MESH:A.07.231.908;;MIAA:0000037;;ncithesaurus:Vein;;OpenCyc:Mx4rvVjkWpwpEbGdrcN5Y29ycA;;SCTID:181367001;;TAO:0000082;;VHOG:0001252;;XAO:0000115;;ZFA:0000082 | |||
}} | }} |
Latest revision as of 17:19, 12 September 2014
Name: | vein | |
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Namespace: | FANTOM | |
Definition: | "Any of the tubular branching vessels that carry blood from the capillaries toward the heart." [Wikipedia:Vein] | |
Xrefs: |
| |
Synonyms: |
"vena" RELATED LATIN [Wikipedia:Vein] "venous subtree" BROAD [] "venous tree organ part" EXACT [] "venous vessel" BROAD [] | |
Comments: | TODO - check with MA - vein vs venous blood vessel | |
Alt_id: | UBERON:FMA_50723-MA_0000066-MA_0000067-MIAA_0000037-XAO_0000115-ZFA_0000082 | |
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0003920(venous blood vessel) |
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Children
is a: | UBERON:0002066 (umbilical vein) |
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derives from: | FF:0010191 (human vein - adult sample) |
part of: | CL:0002543 (vein endothelial cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10191-103E2 (vein, adult)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11344-117G3 (Endothelial Cells - Vein, donor2)
- 11400-118D5 (Endothelial Cells - Umbilical vein, donor3)
- 11416-118F3 (Endothelial Cells - Vein, donor3)
- 11541-120B2 (Smooth Muscle Cells - Umbilical Vein, donor1)
- 11621-122B1 (Smooth Muscle Cells - Umbilical Vein, donor2)
- 11702-123B1 (Smooth Muscle Cells - Umbilical Vein, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001638 (vein), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Part of the circulatory system composed of blood vessels which carry blood from other organs, tissues, and cells to the heart.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.