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{{UBERON
{{UBERON
|id=UBERON:0001982
|alt_id=UBERON:FMA_63194-MA_0000065-XAO_0000116
|name=capillary
|namespace=
|def="Microvessel of the blood circulation system lined with vascular endothelial cells[ZFA]. Any of the smallest blood vessels connecting arterioles with venules." [NLM:capillary, Wikipedia:Capillary]
|xref=AAO:0010252;;BTO:0002045;;EFO:0001906;;EMAPA:28039;;EMAPA:28075;;EV:0100035;;FMA:63194;;http://upload.wikimedia.org/wikipedia/commons/2/2f/A_red_blood_cell_in_a_capillary\,_pancreatic_tissue_-_TEM.jpg;;MA:0000065;;MESH:A.07.231.432.410;;ncithesaurus:Capillary;;NIF_GrossAnatomy:nlx_anat_090902;;OpenCyc:Mx4rvWEU-5wpEbGdrcN5Y29ycA;;TAO:0005250;;VHOG:0001253;;XAO:0000116;;ZFA:0005250
|is_a=UBERON:0001981;;UBERON:0010523
|synonym="blood capillary" EXACT [];;"capillary vessel" EXACT []
|comment=
|comment=
|alt_id=UBERON:FMA_63194-MA_0000065-XAO_0000116
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Microvessel of the blood circulation system lined with vascular endothelial cells[ZFA]. Any of the smallest blood vessels connecting arterioles with venules." [NLM:capillary, Wikipedia:Capillary]
|subset=uberon_slim;;vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001982
|is_a=UBERON:0001981 ;;UBERON:0010523
|is_obsolete=
|located_in=
|located_in=
|name=capillary
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Any of the tiny blood vessels connecting the arterioles to the venules.[AAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Any of the tiny blood vessels connecting the arterioles to the venules.[AAO]" xsd:string
|is_obsolete=
|subset=uberon_slim;;vertebrate_core
|preceded_by=
|synonym="blood capillary" EXACT [];;"capillary vessel" EXACT []
|union_of=
|xref=AAO:0010252;;BTO:0002045;;EFO:0001906;;EMAPA:28039;;EMAPA:28075;;EV:0100035;;FMA:63194;;http://upload.wikimedia.org/wikipedia/commons/2/2f/A_red_blood_cell_in_a_capillary\,_pancreatic_tissue_-_TEM.jpg;;MA:0000065;;MESH:A.07.231.432.410;;ncithesaurus:Capillary;;NIF_GrossAnatomy:nlx_anat_090902;;OpenCyc:Mx4rvWEU-5wpEbGdrcN5Y29ycA;;TAO:0005250;;VHOG:0001253;;XAO:0000116;;ZFA:0005250
}}
}}

Latest revision as of 17:23, 12 September 2014

Name:capillary
Namespace:FANTOM
Definition:"Microvessel of the blood circulation system lined with vascular endothelial cells[ZFA]. Any of the smallest blood vessels connecting arterioles with venules." [NLM:capillary, Wikipedia:Capillary]
Xrefs:
links:

AAO:0010252
BTO:0002045
EFO:0001906
EMAPA:28039
EMAPA:28075
EV:0100035
FMA:63194
[1]
MA:0000065
MESH:A.07.231.432.410
ncithesaurus:Capillary
NIF_GrossAnatomy:nlx_anat_090902
OpenCyc:Mx4rvWEU-5wpEbGdrcN5Y29ycA
TAO:0005250
VHOG:0001253
XAO:0000116

ZFA:0005250
Synonyms: "blood capillary" EXACT []
"capillary vessel" EXACT []
Alt_id: UBERON:FMA_63194-MA_0000065-XAO_0000116
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001981(blood vessel),UBERON:0010523(microcirculatory vessel)



Children

is a:UBERON:2005260 (fenestrated capillary)
part of:UBERON:0001915 (endothelium of capillary)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 11265-116G5 (Endothelial Cells - Microvascular, donor1)
  • 11342-117G1 (Endothelial Cells - Microvascular, donor2)
  • 11414-118F1 (Endothelial Cells - Microvascular, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001982 (capillary), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Any of the tiny blood vessels connecting the arterioles to the venules.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.