UBERON:0003082: Difference between revisions
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|located_in= | |located_in= | ||
|name=myotome | |name=myotome | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000926 | |part_of=UBERON:0000926 |
Latest revision as of 17:37, 12 September 2014
Name: | myotome | |
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Namespace: | FANTOM | |
Definition: | "A group of tissues formed from somites that develop into the body wall muscle[WP]. Somitic compartment that is a precursor of muscle. mesoderm that is derived from the somite that is fated to become the musculature[MP]. Portion of the somites giving rise to body wall muscle masses[ZFA]" [MP:0003939, PMID:17313522, Wikipedia:Myotome, ZFIN:curator] | |
Xrefs: |
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Synonyms: |
"muscle plate" RELATED [] "myomere" RELATED [] "myotome region" RELATED [] "myotomes" RELATED [] "myotomus" RELATED LATIN [Wikipedia:Myotome] | |
Comments: | Editors note: The term "myotome" is also used to describe the muscles served by a single nerve root / spinal segment - consider adding new class. | |
Alt_id: | UBERON:XAO_0000315-ZFA_0001056 | |
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0017650(developing mesenchymal structure) |
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develops_from: | UBERON:0002329(somite),UBERON:0004290(dermomyotome) |
part_of: | UBERON:0000926(mesoderm) |
Children
develops from: | UBERON:0001134 (skeletal muscle tissue),UBERON:0014892 (skeletal muscle organ) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003082 (myotome), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of the somites giving rise to body wall muscle masses. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.