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{{UBERON
{{UBERON
|id=UBERON:0003101
|alt_id=UBERON:XAO_0003006-ZFA_0000242
|name=male organism
|namespace=
|def="Gonochoristic organism that can produce male gametes." [CARO:0000027]
|xref=AAO:0010033;;BILA:0000027;;CARO:0000027;;FBbt:00007004;;FMA:67811;;HAO:0000027;;TAO:0000242;;TGMA:0001838;;WBbt:0007850;;XAO:0003006;;ZFA:0000242
|is_a=UBERON:0000468
|synonym="male" RELATED [TAO:0000242];;"male human body" NARROW SENSU [FMA:67811]
|comment=
|comment=
|alt_id=UBERON:XAO_0003006-ZFA_0000242
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Gonochoristic organism that can produce male gametes." [CARO:0000027]
|subset=vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003101
|is_a=UBERON:0000468
|is_obsolete=
|located_in=
|located_in=
|name=male organism
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=vertebrate_core
|preceded_by=
|synonym="male" RELATED [TAO:0000242];;"male human body" NARROW SENSU [FMA:67811]
|union_of=
|xref=AAO:0010033;;BILA:0000027;;CARO:0000027;;FBbt:00007004;;FMA:67811;;HAO:0000027;;TAO:0000242;;TGMA:0001838;;WBbt:0007850;;XAO:0003006;;ZFA:0000242
}}
}}

Latest revision as of 17:37, 12 September 2014

Name:male organism
Namespace:FANTOM
Definition:"Gonochoristic organism that can produce male gametes." [CARO:0000027]
Xrefs:
links:

AAO:0010033
BILA:0000027
CARO:0000027
FBbt:00007004
FMA:67811
HAO:0000027
TAO:0000242
TGMA:0001838
WBbt:0007850
XAO:0003006

ZFA:0000242
Synonyms: "male" RELATED [TAO:0000242]
"male human body" NARROW SENSU [FMA:67811]
Alt_id: UBERON:XAO_0003006-ZFA_0000242
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000468(multi-cellular organism)



Children

disjoint from:UBERON:0003100 (female organism)
part of:UBERON:0000079 (male reproductive system),UBERON:0003135 (male reproductive organ),UBERON:0014403 (male anatomical structure)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003101 (male organism), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data