UBERON:0003113: Difference between revisions
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|located_in= | |located_in= | ||
|name=dermatocranium | |name=dermatocranium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0010323;;UBERON:0010364 | |part_of=UBERON:0010323;;UBERON:0010364 | ||
Latest revision as of 17:38, 12 September 2014
| Name: | dermatocranium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Subdivision of skeleton that includes all dermal bones in the cranial skeleton[ZFA,modified]." [Wikipedia:Skull_roof, ZFA:0000863] | ||
| Xrefs: |
| ||
| Synonyms: |
"dermal bone cranium" RELATED [ZFA:0000863] "dermal part of skull" RELATED [] "roof of skull" EXACT [Wikipedia:Skull_roof] "roofing bones of the skull" EXACT [Wikipedia:Skull_roof] "skull roof" EXACT [Wikipedia:Skull_roof] | ||
| Alt_id: | UBERON:ZFA_0000863-XAO_0003169 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0011159(primary subdivision of cranial skeletal system) |
|---|---|
| part_of: | UBERON:0010323(cranial skeletal system),UBERON:0010364(dermal skeleton) |
Children
| part of: | UBERON:0002244 (premaxilla),UBERON:0002397 (maxilla),UBERON:0011628 (early premaxilla) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003113 (dermatocranium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_6557b16ad440aff192f5d85e10464ccd | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_6557b16ad440aff192f5d85e10464ccd | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_ceedbdb1f66fc22776164abb965eed68 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_ceedbdb1f66fc22776164abb965eed68 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_ceedbdb1f66fc22776164abb965eed68 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_ceedbdb1f66fc22776164abb965eed68 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_ceedbdb1f66fc22776164abb965eed68 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_ceedbdb1f66fc22776164abb965eed68 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_ceedbdb1f66fc22776164abb965eed68 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_ceedbdb1f66fc22776164abb965eed68 | p13@C17orf67 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_9a5b9664777fe9f917f53185e579c451 | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_9a5b9664777fe9f917f53185e579c451 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_9a5b9664777fe9f917f53185e579c451 | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_9a5b9664777fe9f917f53185e579c451 | p14@MAB21L2 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_b459996e3429ebdec08324f2720a201c | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_b459996e3429ebdec08324f2720a201c | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_62745f1df2e73693cf47aa064a350bff | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_62745f1df2e73693cf47aa064a350bff | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_62745f1df2e73693cf47aa064a350bff | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_62745f1df2e73693cf47aa064a350bff | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_62745f1df2e73693cf47aa064a350bff | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_62745f1df2e73693cf47aa064a350bff | p@chr8:57354278..57354286, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_37655cbc931aa1d7a8d95b6ad7f6e06e | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_37655cbc931aa1d7a8d95b6ad7f6e06e | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_e35f8b6c8505defc010f09014fa523dc | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_e35f8b6c8505defc010f09014fa523dc | p7@ALX1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_e35f8b6c8505defc010f09014fa523dc | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_e35f8b6c8505defc010f09014fa523dc | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_e35f8b6c8505defc010f09014fa523dc | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_e35f8b6c8505defc010f09014fa523dc | p7@ALX1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_c5358d9e1216c8a0d6963cb84a0764e1 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_c5358d9e1216c8a0d6963cb84a0764e1 | p23@FLT1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_c5358d9e1216c8a0d6963cb84a0764e1 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_c5358d9e1216c8a0d6963cb84a0764e1 | p23@FLT1 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_737ad6b1bf16042972162214712fd2bd | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_737ad6b1bf16042972162214712fd2bd | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_737ad6b1bf16042972162214712fd2bd | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_737ad6b1bf16042972162214712fd2bd | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_737ad6b1bf16042972162214712fd2bd | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_737ad6b1bf16042972162214712fd2bd | p@chr8:57353666..57353675, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_9d6d9d75bd1e75bb7fb214bd0c737b05 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_9d6d9d75bd1e75bb7fb214bd0c737b05 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_9d6d9d75bd1e75bb7fb214bd0c737b05 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_9d6d9d75bd1e75bb7fb214bd0c737b05 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_9d6d9d75bd1e75bb7fb214bd0c737b05 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_9d6d9d75bd1e75bb7fb214bd0c737b05 | p8@LHX8 |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_6fb7766bd4829d82deae19e24e838eb5 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_6fb7766bd4829d82deae19e24e838eb5 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_6fb7766bd4829d82deae19e24e838eb5 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_6fb7766bd4829d82deae19e24e838eb5 | p@chr5:75912831..75912842, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_5a776726c59fa844e79ca2121e461d9a | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_5a776726c59fa844e79ca2121e461d9a | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_5a776726c59fa844e79ca2121e461d9a | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_5a776726c59fa844e79ca2121e461d9a | p@chr9:125165007..125165016, + |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_d6cd0efb372dc2aad7aa1e9703d26307 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_d6cd0efb372dc2aad7aa1e9703d26307 | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_d6cd0efb372dc2aad7aa1e9703d26307 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_d6cd0efb372dc2aad7aa1e9703d26307 | p4@CPZ |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_d6cd0efb372dc2aad7aa1e9703d26307 | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_d6cd0efb372dc2aad7aa1e9703d26307 | p5@PENK |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_e4b79bee1929d4f284644411720cbd54 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_e4b79bee1929d4f284644411720cbd54 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_6394190807db1c3aae2eaf425d800175 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_6394190807db1c3aae2eaf425d800175 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_010675feaf0f0b82416ae7b5756d7833 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_010675feaf0f0b82416ae7b5756d7833 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_010675feaf0f0b82416ae7b5756d7833 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_010675feaf0f0b82416ae7b5756d7833 | p@chr13:58291223..58291226, + |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_b29de01f1ba3fa5682e4d7b434236644 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_b29de01f1ba3fa5682e4d7b434236644 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_b29de01f1ba3fa5682e4d7b434236644 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_b29de01f1ba3fa5682e4d7b434236644 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_b29de01f1ba3fa5682e4d7b434236644 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_b29de01f1ba3fa5682e4d7b434236644 | p@chr5:19721484..19721507, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_fede296a0662c2c8dee5c5ee9289e6fd | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_fede296a0662c2c8dee5c5ee9289e6fd | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_fede296a0662c2c8dee5c5ee9289e6fd | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_fede296a0662c2c8dee5c5ee9289e6fd | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_fede296a0662c2c8dee5c5ee9289e6fd | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_fede296a0662c2c8dee5c5ee9289e6fd | p@chr8:57354360..57354367, + |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_e4c441458f8ca4012428c80616175cf3 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_e4c441458f8ca4012428c80616175cf3 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_e4c441458f8ca4012428c80616175cf3 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_e4c441458f8ca4012428c80616175cf3 | p10@ITGA8 |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_518272ba20ad00c57b0bfe4e985a66ed | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_518272ba20ad00c57b0bfe4e985a66ed | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_518272ba20ad00c57b0bfe4e985a66ed | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_518272ba20ad00c57b0bfe4e985a66ed | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_518272ba20ad00c57b0bfe4e985a66ed | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_518272ba20ad00c57b0bfe4e985a66ed | p@chrX:132670143..132670152, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_96e6e955b6c034f1b7ea64f0a67c93d6 | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_96e6e955b6c034f1b7ea64f0a67c93d6 | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_9d7daa802d754715fb4890d346ab66f2 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_9d7daa802d754715fb4890d346ab66f2 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_9d7daa802d754715fb4890d346ab66f2 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_9d7daa802d754715fb4890d346ab66f2 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_9d7daa802d754715fb4890d346ab66f2 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_9d7daa802d754715fb4890d346ab66f2 | p18@MEF2D |
| 4.2e-29 | FFCP PHASE1:Hg19::chr4:151503350..151503358,+#_916777f982a2fbd39d10e8536d96fbac | p11@MAB21L2 |
| 4.2e-29 | FFCP PHASE2:Hg19::chr13:36046127..36046134,+#_916777f982a2fbd39d10e8536d96fbac | p@chr13:36046127..36046134, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that is part of the cranium and composed of dermally derived bones.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that is part of the cranium which consists of dermally derived bones.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
