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{{UBERON
{{UBERON
|id=UBERON:0003134
|alt_id=
|name=female reproductive organ
|namespace=
|def="A female organ involved in reproduction" [UBERON:xp]
|xref=EMAPA:17959;;MA:0000544
|is_a=UBERON:0003133
|synonym="female organism reproductive organ" EXACT [OBOL:automatic];;"female organism reproductive structure" EXACT [OBOL:automatic];;"female organism reproductive system organ" EXACT [OBOL:automatic];;"female organism sex organ" EXACT [OBOL:automatic];;"female reproductive system organ" EXACT [];;"female sex organ" EXACT [];;"reproductive organ of female organism" EXACT [OBOL:automatic];;"reproductive structure of female organism" EXACT [OBOL:automatic];;"reproductive system organ of female organism" EXACT [OBOL:automatic];;"sex organ of female organism" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A female organ involved in reproduction" [UBERON:xp]
|subset=organ_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003134
|is_a=UBERON:0003133 ;;UBERON:0014404
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0000474;;UBERON:0003100
|name=female reproductive organ
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003100;;UBERON:0000474;;UBERON:0003100
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim
|preceded_by=
|synonym="female organism reproductive organ" EXACT [OBOL:automatic];;"female organism reproductive structure" EXACT [OBOL:automatic];;"female organism reproductive system organ" EXACT [OBOL:automatic];;"female organism sex organ" EXACT [OBOL:automatic];;"female reproductive system organ" EXACT [];;"female sex organ" EXACT [];;"reproductive organ of female organism" EXACT [OBOL:automatic];;"reproductive structure of female organism" EXACT [OBOL:automatic];;"reproductive system organ of female organism" EXACT [OBOL:automatic];;"sex organ of female organism" EXACT [OBOL:automatic]
|union_of=
|xref=EMAPA:17959;;MA:0000544
}}
}}

Latest revision as of 17:38, 12 September 2014

Name:female reproductive organ
Namespace:FANTOM
Definition:"A female organ involved in reproduction" [UBERON:xp]
Xrefs:
links:

EMAPA:17959

MA:0000544
Synonyms: "female organism reproductive organ" EXACT [OBOL:automatic]
"female organism reproductive structure" EXACT [OBOL:automatic]
"female organism reproductive system organ" EXACT [OBOL:automatic]
"female organism sex organ" EXACT [OBOL:automatic]
"female reproductive system organ" EXACT []
"female sex organ" EXACT []
"reproductive organ of female organism" EXACT [OBOL:automatic]
"reproductive structure of female organism" EXACT [OBOL:automatic]
"reproductive system organ of female organism" EXACT [OBOL:automatic]
"sex organ of female organism" EXACT [OBOL:automatic]
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003133(reproductive organ),UBERON:0014404(female anatomical structure)
part_of:UBERON:0003100(female organism),UBERON:0000474(female reproductive system),UBERON:0003100(female organism)



Children

is a:UBERON:0000992 (female gonad),UBERON:0003975 (internal female genitalia),UBERON:0005056 (external female genitalia),FF:10689-109F5 (mixed mullerian tumor cell line:HTMMT)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003134 (female reproductive organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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