Personal tools

UBERON:0003937: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0003937
|alt_id=
|name=sex gland
|namespace=
|def="any of the organized aggregations of cells that function as secretory or excretory organs and are associated with reproduction" [MP:0000653]
|xref=MA:0001751
|is_a=UBERON:0002530;;UBERON:0005156
|synonym="genitalia gland" EXACT [OBOL:automatic];;"gland of genitalia" EXACT [OBOL:automatic];;"gland of reproductive system" EXACT [OBOL:automatic];;"reproductive gland" EXACT [MA:0001751];;"reproductive system gland" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="any of the organized aggregations of cells that function as secretory or excretory organs and are associated with reproduction" [MP:0000653]
|subset=organ_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003937
|is_a=UBERON:0002530 ;;UBERON:0005156
|is_obsolete=
|located_in=
|located_in=
|name=sex gland
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000990
|part_of=UBERON:0000990
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim
|preceded_by=
|synonym="genitalia gland" EXACT [OBOL:automatic];;"gland of genitalia" EXACT [OBOL:automatic];;"gland of reproductive system" EXACT [OBOL:automatic];;"reproductive gland" EXACT [MA:0001751];;"reproductive system gland" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0001751
}}
}}

Latest revision as of 17:42, 12 September 2014

Name:sex gland
Namespace:FANTOM
Definition:"any of the organized aggregations of cells that function as secretory or excretory organs and are associated with reproduction" [MP:0000653]
Xrefs:
links:
MA:0001751
Synonyms: "genitalia gland" EXACT [OBOL:automatic]
"gland of genitalia" EXACT [OBOL:automatic]
"gland of reproductive system" EXACT [OBOL:automatic]
"reproductive gland" EXACT [MA:0001751]
"reproductive system gland" EXACT [OBOL:automatic]
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002530(gland),UBERON:0005156(reproductive structure)
part_of:UBERON:0000990(reproductive system)



Children

is a:UBERON:0005399 (male reproductive gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003937 (sex gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr2:164159985..164159998,-#_757830caf9d7881cfcd423653ce8dd49p@chr2:164159985..164159998, -
1.87e-86FFCP PHASE1:Mm9::chr7:54982725..54982729,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:54982725..54982729, +
1.87e-86FFCP PHASE1:Mm9::chr7:28924785..28924802,-#_757830caf9d7881cfcd423653ce8dd49p@chr7:28924785..28924802, -
1.87e-86FFCP PHASE1:Mm9::chr1:72989013..72989023,+#_757830caf9d7881cfcd423653ce8dd49p@chr1:72989013..72989023, +
1.87e-86FFCP PHASE2:Mm9::chr2:80157036..80157037,+#_757830caf9d7881cfcd423653ce8dd49p@chr2:80157036..80157037, +
1.87e-86FFCP PHASE2:Mm9::chr7:28924981..28924990,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28924981..28924990, +
1.87e-86FFCP PHASE1:Mm9::chr9:36341591..36341600,-#_757830caf9d7881cfcd423653ce8dd49p@chr9:36341591..36341600, -
1.87e-86FFCP PHASE1:Mm9::chr6:42535959..42535970,+#_757830caf9d7881cfcd423653ce8dd49p@chr6:42535959..42535970, +
1.87e-86FFCP PHASE1:Mm9::chr2:128083441..128083479,-#_757830caf9d7881cfcd423653ce8dd49p@chr2:128083441..128083479, -
1.87e-86FFCP PHASE2:Mm9::chr7:28940253..28940263,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28940253..28940263, +
1.87e-86FFCP PHASE1:Mm9::chr7:28942648..28942659,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28942648..28942659, +
1.87e-86FFCP PHASE1:Mm9::chr7:28900300..28900312,-#_757830caf9d7881cfcd423653ce8dd49p@chr7:28900300..28900312, -
1.87e-86FFCP PHASE1:Mm9::chr1:154639025..154639034,+#_757830caf9d7881cfcd423653ce8dd49p@chr1:154639025..154639034, +
1.87e-86FFCP PHASE1:Mm9::chr12:32075708..32075715,+#_757830caf9d7881cfcd423653ce8dd49p6@Slc26a3
1.87e-86FFCP PHASE2:Mm9::chr2:32513018..32513029,+#_757830caf9d7881cfcd423653ce8dd49p@chr2:32513018..32513029, +
1.87e-86FFCP PHASE2:Mm9::chr9:122965548..122965554,+#_757830caf9d7881cfcd423653ce8dd49p@chr9:122965548..122965554, +
1.87e-86FFCP PHASE2:Mm9::chr11:94226733..94226740,-#_757830caf9d7881cfcd423653ce8dd49p@chr11:94226733..94226740, -
1.87e-86FFCP PHASE1:Mm9::chr9:122965548..122965554,+#_757830caf9d7881cfcd423653ce8dd49p@chr9:122965548..122965554, +
1.87e-86FFCP PHASE2:Mm9::chr2:103012501..103012510,-#_757830caf9d7881cfcd423653ce8dd49p@chr2:103012501..103012510, -
1.87e-86FFCP PHASE2:Mm9::chr2:9804249..9804273,+#_757830caf9d7881cfcd423653ce8dd49p2@ENSMUST00000114919
1.87e-86FFCP PHASE2:Mm9::chr10:43415256..43415275,+#_757830caf9d7881cfcd423653ce8dd49p@chr10:43415256..43415275, +
1.87e-86FFCP PHASE2:Mm9::chr3:89459062..89459092,-#_757830caf9d7881cfcd423653ce8dd49p@chr3:89459062..89459092, -
1.87e-86FFCP PHASE1:Mm9::chr2:164159985..164159998,-#_757830caf9d7881cfcd423653ce8dd49p@chr2:164159985..164159998, -
1.87e-86FFCP PHASE1:Mm9::chr18:65665144..65665191,-#_757830caf9d7881cfcd423653ce8dd49p@chr18:65665144..65665191, -
1.87e-86FFCP PHASE1:Mm9::chr7:28931865..28931876,-#_757830caf9d7881cfcd423653ce8dd49p@chr7:28931865..28931876, -
1.87e-86FFCP PHASE1:Mm9::chr6:41990141..41990152,-#_757830caf9d7881cfcd423653ce8dd49p@chr6:41990141..41990152, -
1.87e-86FFCP PHASE2:Mm9::chr7:54955502..54955506,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:54955502..54955506, +
1.87e-86FFCP PHASE2:Mm9::chr7:28937836..28937843,-#_757830caf9d7881cfcd423653ce8dd49p@chr7:28937836..28937843, -
1.87e-86FFCP PHASE1:Mm9::chr7:28940230..28940239,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28940230..28940239, +
1.87e-86FFCP PHASE2:Mm9::chr4:152404564..152404614,-#_757830caf9d7881cfcd423653ce8dd49p@chr4:152404564..152404614, -
1.87e-86FFCP PHASE2:Mm9::chr9:36444811..36444823,-#_757830caf9d7881cfcd423653ce8dd49p@chr9:36444811..36444823, -
1.87e-86FFCP PHASE2:Mm9::chr14:63674048..63674073,+#_757830caf9d7881cfcd423653ce8dd49p@chr14:63674048..63674073, +
1.87e-86FFCP PHASE1:Mm9::chr10:53713575..53713582,-#_757830caf9d7881cfcd423653ce8dd49p@chr10:53713575..53713582, -
1.87e-86FFCP PHASE2:Mm9::chr7:28947883..28947894,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28947883..28947894, +
1.87e-86FFCP PHASE2:Mm9::chr7:28916770..28916787,-#_757830caf9d7881cfcd423653ce8dd49p@chr7:28916770..28916787, -
1.87e-86FFCP PHASE1:Mm9::chr7:28922123..28922130,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28922123..28922130, +
1.87e-86FFCP PHASE1:Mm9::chr6:124520338..124520341,+#_757830caf9d7881cfcd423653ce8dd49p5@C1rb
1.87e-86FFCP PHASE1:Mm9::chr9:122976236..122976242,+#_757830caf9d7881cfcd423653ce8dd49p@chr9:122976236..122976242, +
1.87e-86FFCP PHASE1:Mm9::chr3:105606540..105606551,+#_757830caf9d7881cfcd423653ce8dd49p@chr3:105606540..105606551, +
1.87e-86FFCP PHASE1:Mm9::chr2:164159170..164159177,+#_757830caf9d7881cfcd423653ce8dd49p6@Svs5
1.87e-86FFCP PHASE1:Mm9::chr18:44360499..44360503,+#_757830caf9d7881cfcd423653ce8dd49p1@ENSMUST00000097586
1.87e-86FFCP PHASE1:Mm9::chr7:28927304..28927321,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28927304..28927321, +
1.87e-86FFCP PHASE2:Mm9::chr1:72989013..72989023,+#_757830caf9d7881cfcd423653ce8dd49p@chr1:72989013..72989023, +
1.87e-86FFCP PHASE2:Mm9::chr2:8718673..8718686,+#_757830caf9d7881cfcd423653ce8dd49p@chr2:8718673..8718686, +
1.87e-86FFCP PHASE2:Mm9::chr7:28927608..28927615,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28927608..28927615, +
1.87e-86FFCP PHASE1:Mm9::chr3:89459062..89459092,-#_757830caf9d7881cfcd423653ce8dd49p@chr3:89459062..89459092, -
1.87e-86FFCP PHASE2:Mm9::chr9:36339759..36339765,-#_757830caf9d7881cfcd423653ce8dd49p@chr9:36339759..36339765, -
1.87e-86FFCP PHASE2:Mm9::chr3:94930140..94930149,+#_757830caf9d7881cfcd423653ce8dd49p6@Tmod4
1.87e-86FFCP PHASE2:Mm9::chr7:28914531..28914532,+#_757830caf9d7881cfcd423653ce8dd49p11@9530053A07Rik
1.87e-86FFCP PHASE2:Mm9::chr2:164063067..164063075,+#_757830caf9d7881cfcd423653ce8dd49p@chr2:164063067..164063075, +
1.87e-86FFCP PHASE2:Mm9::chr9:122976236..122976242,+#_757830caf9d7881cfcd423653ce8dd49p@chr9:122976236..122976242, +
1.87e-86FFCP PHASE1:Mm9::chr7:55028182..55028186,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:55028182..55028186, +
1.87e-86FFCP PHASE1:Mm9::chr7:28924981..28924990,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28924981..28924990, +
1.87e-86FFCP PHASE2:Mm9::chr7:28925214..28925235,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28925214..28925235, +
1.87e-86FFCP PHASE1:Mm9::chr11:120000721..120000736,-#_757830caf9d7881cfcd423653ce8dd49p@chr11:120000721..120000736, -
1.87e-86FFCP PHASE2:Mm9::chr6:42536364..42536367,-#_757830caf9d7881cfcd423653ce8dd49p@chr6:42536364..42536367, -
1.87e-86FFCP PHASE2:Mm9::chr14:69839714..69839737,-#_757830caf9d7881cfcd423653ce8dd49p@chr14:69839714..69839737, -
1.87e-86FFCP PHASE1:Mm9::chr8:93017024..93017030,+#_757830caf9d7881cfcd423653ce8dd49p@chr8:93017024..93017030, +
1.87e-86FFCP PHASE1:Mm9::chr6:42536144..42536171,-#_757830caf9d7881cfcd423653ce8dd49p@chr6:42536144..42536171, -
1.87e-86FFCP PHASE2:Mm9::chr7:28942544..28942554,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28942544..28942554, +
1.87e-86FFCP PHASE2:Mm9::chr7:28900616..28900625,+#_757830caf9d7881cfcd423653ce8dd49p12@Fcgbp
1.87e-86FFCP PHASE1:Mm9::chr7:28943007..28943015,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28943007..28943015, +
1.87e-86FFCP PHASE1:Mm9::chr7:28914121..28914125,+#_757830caf9d7881cfcd423653ce8dd49p5@9530053A07Rik
1.87e-86FFCP PHASE2:Mm9::chr9:122969685..122969689,+#_757830caf9d7881cfcd423653ce8dd49p@chr9:122969685..122969689, +
1.87e-86FFCP PHASE2:Mm9::chr10:40222667..40222711,-#_757830caf9d7881cfcd423653ce8dd49p@chr10:40222667..40222711, -
1.87e-86FFCP PHASE1:Mm9::chr9:122969685..122969689,+#_757830caf9d7881cfcd423653ce8dd49p@chr9:122969685..122969689, +
1.87e-86FFCP PHASE1:Mm9::chr6:88218829..88218838,-#_757830caf9d7881cfcd423653ce8dd49p@chr6:88218829..88218838, -
1.87e-86FFCP PHASE1:Mm9::chr2:9803130..9803139,+#_757830caf9d7881cfcd423653ce8dd49p1@ENSMUST00000026889
1.87e-86FFCP PHASE1:Mm9::chr7:54955306..54955320,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:54955306..54955320, +
1.87e-86FFCP PHASE1:Mm9::chr1:55821487..55821490,-#_757830caf9d7881cfcd423653ce8dd49p@chr1:55821487..55821490, -
1.87e-86FFCP PHASE2:Mm9::chr6:42535959..42535970,+#_757830caf9d7881cfcd423653ce8dd49p@chr6:42535959..42535970, +
1.87e-86FFCP PHASE1:Mm9::chr7:28937836..28937843,-#_757830caf9d7881cfcd423653ce8dd49p@chr7:28937836..28937843, -
1.87e-86FFCP PHASE2:Mm9::chr7:55028116..55028147,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:55028116..55028147, +
1.87e-86FFCP PHASE2:Mm9::chr7:28939659..28939670,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28939659..28939670, +
1.87e-86FFCP PHASE1:Mm9::chr7:28942544..28942554,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28942544..28942554, +
1.87e-86FFCP PHASE1:Mm9::chr12:17361677..17361698,+#_757830caf9d7881cfcd423653ce8dd49p1@Mir3066
1.87e-86FFCP PHASE2:Mm9::chr9:122960302..122960322,+#_757830caf9d7881cfcd423653ce8dd49p@chr9:122960302..122960322, +
1.87e-86FFCP PHASE2:Mm9::chr19:41338815..41338828,-#_757830caf9d7881cfcd423653ce8dd49p5@Tm9sf3
1.87e-86FFCP PHASE1:Mm9::chr9:122960302..122960322,+#_757830caf9d7881cfcd423653ce8dd49p@chr9:122960302..122960322, +
1.87e-86FFCP PHASE1:Mm9::chr6:54242893..54242903,+#_757830caf9d7881cfcd423653ce8dd49p@chr6:54242893..54242903, +
1.87e-86FFCP PHASE1:Mm9::chr2:80157145..80157151,+#_757830caf9d7881cfcd423653ce8dd49p@chr2:80157145..80157151, +
1.87e-86FFCP PHASE2:Mm9::chr19:11354181..11354186,-#_757830caf9d7881cfcd423653ce8dd49p@chr19:11354181..11354186, -
1.87e-86FFCP PHASE2:Mm9::chr2:9802670..9802677,-#_757830caf9d7881cfcd423653ce8dd49p@chr2:9802670..9802677, -
1.87e-86FFCP PHASE2:Mm9::chr4:46562125..46562138,-#_757830caf9d7881cfcd423653ce8dd49p@chr4:46562125..46562138, -
1.87e-86FFCP PHASE2:Mm9::chr7:28922127..28922139,-#_757830caf9d7881cfcd423653ce8dd49p@chr7:28922127..28922139, -
1.87e-86FFCP PHASE2:Mm9::chr10:116675686..116675697,-#_757830caf9d7881cfcd423653ce8dd49p3@9530003J23Rik
1.87e-86FFCP PHASE1:Mm9::chrX:75090382..75090387,+#_757830caf9d7881cfcd423653ce8dd49p@chrX:75090382..75090387, +
1.87e-86FFCP PHASE2:Mm9::chr18:44413083..44413113,-#_757830caf9d7881cfcd423653ce8dd49p@chr18:44413083..44413113, -
1.87e-86FFCP PHASE2:Mm9::chr6:41990141..41990152,-#_757830caf9d7881cfcd423653ce8dd49p@chr6:41990141..41990152, -
1.87e-86FFCP PHASE2:Mm9::chr1:154639025..154639034,+#_757830caf9d7881cfcd423653ce8dd49p@chr1:154639025..154639034, +
1.87e-86FFCP PHASE2:Mm9::chr14:56985658..56985672,-#_757830caf9d7881cfcd423653ce8dd49p@chr14:56985658..56985672, -
1.87e-86FFCP PHASE1:Mm9::chr7:28927608..28927615,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28927608..28927615, +
1.87e-86FFCP PHASE1:Mm9::chr12:110113751..110113760,-#_757830caf9d7881cfcd423653ce8dd49p10@LOC640248, p16@Wars
1.87e-86FFCP PHASE2:Mm9::chr11:120000809..120000810,-#_757830caf9d7881cfcd423653ce8dd49p@chr11:120000809..120000810, -
1.87e-86FFCP PHASE2:Mm9::chr7:54771443..54771448,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:54771443..54771448, +
1.87e-86FFCP PHASE2:Mm9::chr7:28932044..28932051,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28932044..28932051, +
1.87e-86FFCP PHASE1:Mm9::chr7:28939647..28939657,+#_757830caf9d7881cfcd423653ce8dd49p@chr7:28939647..28939657, +
1.87e-86FFCP PHASE2:Mm9::chr6:42541896..42541906,-#_757830caf9d7881cfcd423653ce8dd49p@chr6:42541896..42541906, -
1.87e-86FFCP PHASE2:Mm9::chr9:36341591..36341600,-#_757830caf9d7881cfcd423653ce8dd49p@chr9:36341591..36341600, -
1.87e-86FFCP PHASE1:Mm9::chr2:80142485..80142488,+#_757830caf9d7881cfcd423653ce8dd49p@chr2:80142485..80142488, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003937&oldid=3277606"