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UBERON:0004537: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=blood vasculature
|name=blood vasculature
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0004535
|part_of=UBERON:0004535

Latest revision as of 17:46, 12 September 2014

Name:blood vasculature
Namespace:FANTOM
Definition:"a vascular network consisting of blood vessels" [UBERON:cjm]
Xrefs:
links:

TAO:0001079

ZFA:0001079
Synonyms: "blood vascular network" EXACT []
"set of blood vessels" EXACT []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002049(vasculature)
part_of:UBERON:0004535(cardiovascular system)



Children

is a:UBERON:0011362 (cranial blood vasculature)
part of:UBERON:0001981 (blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004537 (blood vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data