UBERON:0004700: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=arterial system endothelium | |name=arterial system endothelium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004572 | |part_of=UBERON:0004572 | ||
Latest revision as of 17:47, 12 September 2014
| Name: | arterial system endothelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An endothelium that is part of an arterial system [Obol]." [OBOL:automatic] | ||
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004852(cardiovascular system endothelium) |
|---|---|
| part_of: | UBERON:0004572(arterial system) |
Children
| is a: | UBERON:0001917 (endothelium of artery) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11341-117F9 (Endothelial Cells - Artery, donor2)
- 11343-117G2 (Endothelial Cells - Thoracic, donor2)
- 11412-118E8 (Endothelial Cells - Aortic, donor3)
- 11413-118E9 (Endothelial Cells - Artery, donor3)
- 11415-118F2
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004700 (arterial system endothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
