UBERON:0004801: Difference between revisions

Latest revision as of 17:48, 12 September 2014

Name:

cervix epithelium

Namespace:

FANTOM

Definition:

"An epithelium that is part of a uterine cervix [Obol]." [OBOL:automatic]

Xrefs:

links:

BTO:0000241
EFO:0001913
MA:0001724

ncithesaurus:Cervix_Epithelium

Synonyms:

"cervical canal epithelial tissue" EXACT [OBOL:automatic]
"cervical canal epithelium" EXACT [OBOL:automatic]
"cervical canal of uterus epithelial tissue" EXACT [OBOL:automatic]
"cervical canal of uterus epithelium" EXACT [OBOL:automatic]
"cervix epithelial tissue" EXACT [OBOL:automatic]
"cervix of uterus epithelial tissue" EXACT [OBOL:automatic]
"cervix of uterus epithelium" EXACT [OBOL:automatic]
"epithelial tissue of cervical canal" EXACT [OBOL:automatic]
"epithelial tissue of cervical canal of uterus" EXACT [OBOL:automatic]
"epithelial tissue of cervix" EXACT [OBOL:automatic]
"epithelial tissue of cervix of uterus" EXACT [OBOL:automatic]
"epithelial tissue of neck of uterus" EXACT [OBOL:automatic]
"epithelial tissue of uterine cervix" EXACT [OBOL:automatic]
"epithelium of cervical canal" EXACT [OBOL:automatic]
"epithelium of cervical canal of uterus" EXACT [OBOL:automatic]
"epithelium of cervix" EXACT [OBOL:automatic]
"epithelium of cervix of uterus" EXACT [OBOL:automatic]
"epithelium of neck of uterus" EXACT [OBOL:automatic]
"epithelium of uterine cervix" EXACT [OBOL:automatic]
"neck of uterus epithelial tissue" EXACT [OBOL:automatic]
"neck of uterus epithelium" EXACT [OBOL:automatic]
"uterine cervix epithelial tissue" EXACT [OBOL:automatic]
"uterine cervix epithelium" EXACT [OBOL:automatic]

Ontology association Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies. link to ontology dataset data

Parents

is_a:	UBERON:0006955(uterine epithelium)
part_of:	UBERON:0000002(uterine cervix)

Children

part of:	CL:0002535 (epithelial cell of cervix)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004801 (cervix epithelium), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Search:

P-value	FFCP	Short description
8.99e-131	FFCP PHASE1:Hg19::chr14:104394868..104394874,+	p5@TDRD9
8.99e-131	FFCP PHASE2:Hg19::chr14:104394868..104394874,+	p5@TDRD9
5.68e-99	FFCP PHASE2:Hg19::chr17:34838949..34838959,-	p@chr17:34838949..34838959, -
5.68e-99	FFCP PHASE1:Hg19::chr17:34838949..34838959,-	p@chr17:34838949..34838959, -
1.55e-98	FFCP PHASE2:Hg19::chr8:121066549..121066554,-	p@chr8:121066549..121066554, -
1.55e-98	FFCP PHASE2:Hg19::chr3:4810204..4810210,+	p34@ITPR1
1.55e-98	FFCP PHASE2:Hg19::chr5:40984132..40984133,+	p@chr5:40984132..40984133, +
1.55e-98	FFCP PHASE2:Hg19::chr20:43726566..43726571,+	p@chr20:43726566..43726571, +
1.55e-98	FFCP PHASE1:Hg19::chr2:9059377..9059382,-	p@chr2:9059377..9059382, -
1.55e-98	FFCP PHASE1:Hg19::chr8:41485005..41485017,-	p@chr8:41485005..41485017, -
1.55e-98	FFCP PHASE1:Hg19::chr17:32314322..32314327,-	p@chr17:32314322..32314327, -
1.55e-98	FFCP PHASE2:Hg19::chr12:14849414..14849417,-	p8@GUCY2C
1.55e-98	FFCP PHASE1:Hg19::chr5:170105957..170105992,-	p@chr5:170105957..170105992, -
1.55e-98	FFCP PHASE2:Hg19::chr22:44377129..44377137,+	p@chr22:44377129..44377137, +
1.55e-98	FFCP PHASE2:Hg19::chr2:9059355..9059366,-	p@chr2:9059355..9059366, -
1.55e-98	FFCP PHASE1:Hg19::chr7:127258190..127258201,-	p2@PAX4
1.55e-98	FFCP PHASE1:Hg19::chr1:207193762..207193766,+	p@chr1:207193762..207193766, +
1.55e-98	FFCP PHASE2:Hg19::chr6:49467646..49467657,+	p1@GLYATL3
1.55e-98	FFCP PHASE2:Hg19::chr17:26911586..26911592,-	p9@SPAG5
1.55e-98	FFCP PHASE1:Hg19::chr2:182546258..182546267,+	p@chr2:182546258..182546267, +
1.55e-98	FFCP PHASE2:Hg19::chr8:41485201..41485208,-	p@chr8:41485201..41485208, -
1.55e-98	FFCP PHASE2:Hg19::chr1:70826186..70826193,-	p4@ENST00000413943
1.55e-98	FFCP PHASE1:Hg19::chr21:47588743..47588750,-	p9@C21orf56
1.55e-98	FFCP PHASE1:Hg19::chr12:131117194..131117202,-	p@chr12:131117194..131117202, -
1.55e-98	FFCP PHASE1:Hg19::chr11:2439293..2439304,-	p@chr11:2439293..2439304, -
1.55e-98	FFCP PHASE2:Hg19::chr20:43727212..43727217,-	p@chr20:43727212..43727217, -
1.55e-98	FFCP PHASE1:Hg19::chr6:49467718..49467724,+	p4@GLYATL3
1.55e-98	FFCP PHASE1:Hg19::chr19:7184762..7184771,-	p@chr19:7184762..7184771, -
1.55e-98	FFCP PHASE1:Hg19::chr8:41486855..41486866,-	p@chr8:41486855..41486866, -
1.55e-98	FFCP PHASE1:Hg19::chr7:150871938..150871949,-	p3@GBX1
1.55e-98	FFCP PHASE1:Hg19::chr6:25661559..25661563,+	p@chr6:25661559..25661563, +
1.55e-98	FFCP PHASE2:Hg19::chr8:121056349..121056360,-	p@chr8:121056349..121056360, -
1.55e-98	FFCP PHASE1:Hg19::chr20:21918470..21918480,+	p@chr20:21918470..21918480, +
1.55e-98	FFCP PHASE1:Hg19::chr17:27892945..27892952,+	p@chr17:27892945..27892952, +
1.55e-98	FFCP PHASE2:Hg19::chr2:182548440..182548448,-	p@chr2:182548440..182548448, -
1.55e-98	FFCP PHASE1:Hg19::chr11:79742692..79742706,+	p@chr11:79742692..79742706, +
1.55e-98	FFCP PHASE2:Hg19::chr12:131117147..131117158,-	p@chr12:131117147..131117158, -
1.55e-98	FFCP PHASE1:Hg19::chr8:121058540..121058543,-	p@chr8:121058540..121058543, -
1.55e-98	FFCP PHASE2:Hg19::chr20:21918450..21918454,+	p@chr20:21918450..21918454, +
1.55e-98	FFCP PHASE2:Hg19::chr11:2436541..2436561,-	p@chr11:2436541..2436561, -
1.55e-98	FFCP PHASE2:Hg19::chr9:35237473..35237478,+	p@chr9:35237473..35237478, +
1.55e-98	FFCP PHASE2:Hg19::chr8:41484957..41484961,-	p@chr8:41484957..41484961, -
1.55e-98	FFCP PHASE1:Hg19::chr17:39755914..39755961,-	p@chr17:39755914..39755961, -
1.55e-98	FFCP PHASE1:Hg19::chr14:93389079..93389083,+	p24@CHGA
1.55e-98	FFCP PHASE1:Hg19::chr11:2436019..2436030,-	p@chr11:2436019..2436030, -
1.55e-98	FFCP PHASE2:Hg19::chr6:39290499..39290502,-	p8@KCNK16
1.55e-98	FFCP PHASE1:Hg19::chr6:49467576..49467583,+	p5@GLYATL3
1.55e-98	FFCP PHASE2:Hg19::chr8:22001308..22001310,-	p@chr8:22001308..22001310, -
1.55e-98	FFCP PHASE2:Hg19::chr1:54417667..54417685,+	p9@LRRC42
1.55e-98	FFCP PHASE1:Hg19::chr8:41485037..41485047,-	p@chr8:41485037..41485047, -
1.55e-98	FFCP PHASE1:Hg19::chr17:32314379..32314387,-	p@chr17:32314379..32314387, -
1.55e-98	FFCP PHASE1:Hg19::chr3:55205086..55205090,-	p@chr3:55205086..55205090, -
1.55e-98	FFCP PHASE1:Hg19::chr20:21918384..21918387,+	p@chr20:21918384..21918387, +
1.55e-98	FFCP PHASE1:Hg19::chr6:39290815..39290820,-	p6@KCNK16
1.55e-98	FFCP PHASE2:Hg19::chr2:9059377..9059382,-	p@chr2:9059377..9059382, -
1.55e-98	FFCP PHASE1:Hg19::chr7:127260123..127260165,+	p@chr7:127260123..127260165, +
1.55e-98	FFCP PHASE2:Hg19::chr18:74350663..74350688,-	p@chr18:74350663..74350688, -
1.55e-98	FFCP PHASE1:Hg19::chr8:121054330..121054333,-	p@chr8:121054330..121054333, -
1.55e-98	FFCP PHASE2:Hg19::chr5:170105957..170105992,-	p@chr5:170105957..170105992, -
1.55e-98	FFCP PHASE2:Hg19::chr6:49467678..49467693,+	p2@GLYATL3
1.55e-98	FFCP PHASE2:Hg19::chr17:26911596..26911605,-	p8@SPAG5
1.55e-98	FFCP PHASE2:Hg19::chr9:91077381..91077392,+	p@chr9:91077381..91077392, +
1.55e-98	FFCP PHASE2:Hg19::chr8:41485217..41485222,-	p@chr8:41485217..41485222, -
1.55e-98	FFCP PHASE2:Hg19::chr7:127258190..127258201,-	p2@PAX4
1.55e-98	FFCP PHASE2:Hg19::chr22:32555214..32555221,-	p2@C22orf42
1.55e-98	FFCP PHASE1:Hg19::chr19:7184803..7184814,-	p@chr19:7184803..7184814, -
1.55e-98	FFCP PHASE2:Hg19::chr17:27892902..27892907,+	p@chr17:27892902..27892907, +
1.55e-98	FFCP PHASE1:Hg19::chr8:41508303..41508308,-	p2@NKX6-3
1.55e-98	FFCP PHASE2:Hg19::chr8:121056549..121056554,-	p@chr8:121056549..121056554, -
1.55e-98	FFCP PHASE2:Hg19::chr19:7184762..7184771,-	p@chr19:7184762..7184771, -
1.55e-98	FFCP PHASE2:Hg19::chr2:182548451..182548457,-	p@chr2:182548451..182548457, -
1.55e-98	FFCP PHASE1:Hg19::chr8:41508626..41508633,+	p@chr8:41508626..41508633, +
1.55e-98	FFCP PHASE2:Hg19::chr7:150871938..150871949,-	p3@GBX1
1.55e-98	FFCP PHASE2:Hg19::chr14:23465559..23465575,-	p@chr14:23465559..23465575, -
1.55e-98	FFCP PHASE2:Hg19::chr12:131117194..131117202,-	p@chr12:131117194..131117202, -
1.55e-98	FFCP PHASE1:Hg19::chr8:121062548..121062551,-	p@chr8:121062548..121062551, -
1.55e-98	FFCP PHASE2:Hg19::chr20:21918470..21918480,+	p@chr20:21918470..21918480, +
1.55e-98	FFCP PHASE2:Hg19::chr11:2439293..2439304,-	p@chr11:2439293..2439304, -
1.55e-98	FFCP PHASE2:Hg19::chr8:41485005..41485017,-	p@chr8:41485005..41485017, -
1.55e-98	FFCP PHASE1:Hg19::chr19:16838056..16838070,+	p@chr19:16838056..16838070, +
1.55e-98	FFCP PHASE1:Hg19::chr12:131117116..131117123,-	p@chr12:131117116..131117123, -
1.55e-98	FFCP PHASE1:Hg19::chr11:2436040..2436051,-	p@chr11:2436040..2436051, -
1.55e-98	FFCP PHASE1:Hg19::chr6:49467630..49467640,+	p3@GLYATL3
1.55e-98	FFCP PHASE1:Hg19::chr8:41485173..41485181,-	p@chr8:41485173..41485181, -
1.55e-98	FFCP PHASE2:Hg19::chr11:79742692..79742706,+	p@chr11:79742692..79742706, +
1.55e-98	FFCP PHASE2:Hg19::chr1:207193762..207193766,+	p@chr1:207193762..207193766, +
1.55e-98	FFCP PHASE2:Hg19::chr12:14849447..14849450,-	p7@GUCY2C
1.55e-98	FFCP PHASE1:Hg19::chr20:21918392..21918404,+	p@chr20:21918392..21918404, +
1.55e-98	FFCP PHASE2:Hg19::chr2:182546258..182546267,+	p@chr2:182546258..182546267, +
1.55e-98	FFCP PHASE2:Hg19::chr21:47588743..47588750,-	p9@C21orf56
1.55e-98	FFCP PHASE1:Hg19::chr6:20705180..20705181,+	p@chr6:20705180..20705181, +
1.55e-98	FFCP PHASE1:Hg19::chr8:121056304..121056311,-	p@chr8:121056304..121056311, -
1.55e-98	FFCP PHASE2:Hg19::chr20:21918384..21918387,+	p@chr20:21918384..21918387, +
1.55e-98	FFCP PHASE2:Hg19::chr11:2436019..2436030,-	p@chr11:2436019..2436030, -
1.55e-98	FFCP PHASE2:Hg19::chr6:49467718..49467724,+	p4@GLYATL3
1.55e-98	FFCP PHASE2:Hg19::chr8:41486855..41486866,-	p@chr8:41486855..41486866, -
1.55e-98	FFCP PHASE2:Hg19::chr7:127260123..127260165,+	p@chr7:127260123..127260165, +
1.55e-98	FFCP PHASE2:Hg19::chr6:25661559..25661563,+	p@chr6:25661559..25661563, +
1.55e-98	FFCP PHASE1:Hg19::chr19:7184828..7184838,-	p@chr19:7184828..7184838, -
1.55e-98	FFCP PHASE2:Hg19::chr17:27892922..27892925,+	p@chr17:27892922..27892925, +

Showing 1 to 100 of 100 entries

@@ Line 1: / Line 1: @@
 {{UBERON
-|id=UBERON:0004801
+|alt_id=
-|name=cervix epithelium
-|namespace=
-|def="An epithelium that is part of a uterine cervix [Obol]." [OBOL:automatic]
-|xref=BTO:0000241;;EFO:0001913;;MA:0001724;;ncithesaurus:Cervix_Epithelium
-|is_a=UBERON:0006955
-|synonym="cervical canal epithelial tissue" EXACT [OBOL:automatic];;"cervical canal epithelium" EXACT [OBOL:automatic];;"cervical canal of uterus epithelial tissue" EXACT [OBOL:automatic];;"cervical canal of uterus epithelium" EXACT [OBOL:automatic];;"cervix epithelial tissue" EXACT [OBOL:automatic];;"cervix of uterus epithelial tissue" EXACT [OBOL:automatic];;"cervix of uterus epithelium" EXACT [OBOL:automatic];;"epithelial tissue of cervical canal" EXACT [OBOL:automatic];;"epithelial tissue of cervical canal of uterus" EXACT [OBOL:automatic];;"epithelial tissue of cervix" EXACT [OBOL:automatic];;"epithelial tissue of cervix of uterus" EXACT [OBOL:automatic];;"epithelial tissue of neck of uterus" EXACT [OBOL:automatic];;"epithelial tissue of uterine cervix" EXACT [OBOL:automatic];;"epithelium of cervical canal" EXACT [OBOL:automatic];;"epithelium of cervical canal of uterus" EXACT [OBOL:automatic];;"epithelium of cervix" EXACT [OBOL:automatic];;"epithelium of cervix of uterus" EXACT [OBOL:automatic];;"epithelium of neck of uterus" EXACT [OBOL:automatic];;"epithelium of uterine cervix" EXACT [OBOL:automatic];;"neck of uterus epithelial tissue" EXACT [OBOL:automatic];;"neck of uterus epithelium" EXACT [OBOL:automatic];;"uterine cervix epithelial tissue" EXACT [OBOL:automatic];;"uterine cervix epithelium" EXACT [OBOL:automatic]
 |comment=
-|alt_id=
-|disjoint_from=
-|union_of=
 |created_by=
-|obo_creation_date=
+|def="An epithelium that is part of a uterine cervix [Obol]." [OBOL:automatic]
-|subset=
-|adjacent_to=
 |derives_from=
 |develops_from=
+|disjoint_from=
 |has_quality=
+|id=UBERON:0004801
+|is_a=UBERON:0006955
+|is_obsolete=
 |located_in=
+|name=cervix epithelium
+|namespace=FANTOM
+|obo_creation_date=
 |part_of=UBERON:0000002
-|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
-|is_obsolete=
 |preceded_by=
+|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
+|subset=
+|synonym="cervical canal epithelial tissue" EXACT [OBOL:automatic];;"cervical canal epithelium" EXACT [OBOL:automatic];;"cervical canal of uterus epithelial tissue" EXACT [OBOL:automatic];;"cervical canal of uterus epithelium" EXACT [OBOL:automatic];;"cervix epithelial tissue" EXACT [OBOL:automatic];;"cervix of uterus epithelial tissue" EXACT [OBOL:automatic];;"cervix of uterus epithelium" EXACT [OBOL:automatic];;"epithelial tissue of cervical canal" EXACT [OBOL:automatic];;"epithelial tissue of cervical canal of uterus" EXACT [OBOL:automatic];;"epithelial tissue of cervix" EXACT [OBOL:automatic];;"epithelial tissue of cervix of uterus" EXACT [OBOL:automatic];;"epithelial tissue of neck of uterus" EXACT [OBOL:automatic];;"epithelial tissue of uterine cervix" EXACT [OBOL:automatic];;"epithelium of cervical canal" EXACT [OBOL:automatic];;"epithelium of cervical canal of uterus" EXACT [OBOL:automatic];;"epithelium of cervix" EXACT [OBOL:automatic];;"epithelium of cervix of uterus" EXACT [OBOL:automatic];;"epithelium of neck of uterus" EXACT [OBOL:automatic];;"epithelium of uterine cervix" EXACT [OBOL:automatic];;"neck of uterus epithelial tissue" EXACT [OBOL:automatic];;"neck of uterus epithelium" EXACT [OBOL:automatic];;"uterine cervix epithelial tissue" EXACT [OBOL:automatic];;"uterine cervix epithelium" EXACT [OBOL:automatic]
+|union_of=
+|xref=BTO:0000241;;EFO:0001913;;MA:0001724;;ncithesaurus:Cervix_Epithelium
 }}

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Latest revision as of 17:48, 12 September 2014

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