UBERON:0004902: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=we follow EHDAA2 in dividing the UGS into epithelium and lumen | |comment=we follow EHDAA2 in dividing the UGS into epithelium and lumen | ||
|created_by= | |created_by= | ||
| | |def="The fetal urogenital sinus (from which the prostate derives) is a simple cylinder of stratified basal epithelium, surrounded by mesenchyme and positioned between the embryonic bladder and pelvic urethra" [PMID:18977204] | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0009846 | |develops_from=UBERON:0009846 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004902 | |||
|is_a=UBERON:0009846 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=urogenital sinus epithelium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000164 | |part_of=UBERON:0000164 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="epithelium of urogenital sinus" EXACT [OBOL:automatic];;"UGE" EXACT [PMID:18977204] | ||
|union_of= | |||
|xref=EHDAA2:0004061 | |||
}} | }} | ||
Latest revision as of 17:49, 12 September 2014
| Name: | urogenital sinus epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The fetal urogenital sinus (from which the prostate derives) is a simple cylinder of stratified basal epithelium, surrounded by mesenchyme and positioned between the embryonic bladder and pelvic urethra" [PMID:18977204] | ||
| Xrefs: |
| ||
| Synonyms: |
"epithelium of urogenital sinus" EXACT [OBOL:automatic] "UGE" EXACT [PMID:18977204] | ||
| Comments: | we follow EHDAA2 in dividing the UGS into epithelium and lumen |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0009846(embryonic cloacal epithelium) |
|---|---|
| develops_from: | UBERON:0009846(embryonic cloacal epithelium) |
| part_of: | UBERON:0000164(primitive urogenital sinus) |
Children
| is a: | UBERON:0009847 (prostate field) |
|---|---|
| part of: | UBERON:0009847 (prostate field) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004902 (urogenital sinus epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:114453231..114453265,-#_8723413afa513aaa41c0931e096ed76a | p@chr12:114453231..114453265, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:37769602..37769611,-#_8723413afa513aaa41c0931e096ed76a | p@chr1:37769602..37769611, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:7699504..7699515,+#_8723413afa513aaa41c0931e096ed76a | p@chr9:7699504..7699515, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42548119..42548136,-#_8723413afa513aaa41c0931e096ed76a | p12@Fam115e |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:152405146..152405150,+#_8723413afa513aaa41c0931e096ed76a | p@chr4:152405146..152405150, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:20186617..20186622,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:20186617..20186622, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:134172953..134172958,+#_8723413afa513aaa41c0931e096ed76a | p@chr6:134172953..134172958, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42547389..42547396,-#_8723413afa513aaa41c0931e096ed76a | p14@Fam115e |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42541927..42541932,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42541927..42541932, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:57320631..57320636,-#_8723413afa513aaa41c0931e096ed76a | p5@Fam114a2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:55028223..55028250,+#_8723413afa513aaa41c0931e096ed76a | p@chr7:55028223..55028250, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:11353179..11353189,-#_8723413afa513aaa41c0931e096ed76a | p@chr19:11353179..11353189, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42536830..42536841,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42536830..42536841, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42548119..42548136,-#_8723413afa513aaa41c0931e096ed76a | p12@Fam115e |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:33251992..33251995,+#_8723413afa513aaa41c0931e096ed76a | p@chr5:33251992..33251995, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42547401..42547411,-#_8723413afa513aaa41c0931e096ed76a | p9@Fam115e |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:36300946..36300953,-#_8723413afa513aaa41c0931e096ed76a | p@chr9:36300946..36300953, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42535984..42535996,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42535984..42535996, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:121069181..121069190,-#_8723413afa513aaa41c0931e096ed76a | p@chr4:121069181..121069190, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:36300946..36300953,-#_8723413afa513aaa41c0931e096ed76a | p@chr9:36300946..36300953, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42543996..42544003,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42543996..42544003, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:93026806..93026816,-#_8723413afa513aaa41c0931e096ed76a | p12@Ston2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:20188882..20188884,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:20188882..20188884, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:102102677..102102684,+#_8723413afa513aaa41c0931e096ed76a | p@chr4:102102677..102102684, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42535216..42535225,+#_8723413afa513aaa41c0931e096ed76a | p@chr6:42535216..42535225, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42535757..42535772,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42535757..42535772, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:73048139..73048141,+#_8723413afa513aaa41c0931e096ed76a | p@chr1:73048139..73048141, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:75093387..75093390,-#_8723413afa513aaa41c0931e096ed76a | p@chrX:75093387..75093390, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:137642090..137642093,-#_8723413afa513aaa41c0931e096ed76a | p8@Col4a6 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42539866..42539870,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42539866..42539870, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:55008002..55008008,-#_8723413afa513aaa41c0931e096ed76a | p@chr7:55008002..55008008, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:122970758..122970759,+#_8723413afa513aaa41c0931e096ed76a | p@chr9:122970758..122970759, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:137020090..137020093,+#_8723413afa513aaa41c0931e096ed76a | p@chr2:137020090..137020093, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42548966..42548969,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42548966..42548969, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:137020090..137020093,+#_8723413afa513aaa41c0931e096ed76a | p@chr2:137020090..137020093, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:20186645..20186650,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:20186645..20186650, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42547300..42547314,-#_8723413afa513aaa41c0931e096ed76a | p7@Fam115e |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42547401..42547411,-#_8723413afa513aaa41c0931e096ed76a | p9@Fam115e |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:57789909..57789916,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:57789909..57789916, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:73048139..73048141,+#_8723413afa513aaa41c0931e096ed76a | p@chr1:73048139..73048141, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:36098306..36098309,+#_8723413afa513aaa41c0931e096ed76a | p5@Ptgs1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:36098306..36098309,+#_8723413afa513aaa41c0931e096ed76a | p5@Ptgs1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:152405146..152405150,+#_8723413afa513aaa41c0931e096ed76a | p@chr4:152405146..152405150, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:20186583..20186592,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:20186583..20186592, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:72981474..72981498,+#_8723413afa513aaa41c0931e096ed76a | p@chr1:72981474..72981498, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:57789909..57789916,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:57789909..57789916, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42548966..42548969,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42548966..42548969, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42536469..42536478,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42536469..42536478, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42536000..42536005,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42536000..42536005, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:122366201..122366206,-#_8723413afa513aaa41c0931e096ed76a | p@chr4:122366201..122366206, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:66314493..66314501,-#_8723413afa513aaa41c0931e096ed76a | p1@uc007nrj.1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42543450..42543455,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42543450..42543455, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:20188895..20188904,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:20188895..20188904, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:126864466..126864469,+#_8723413afa513aaa41c0931e096ed76a | p@chr8:126864466..126864469, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:54242736..54242738,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:54242736..54242738, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:72981474..72981498,+#_8723413afa513aaa41c0931e096ed76a | p@chr1:72981474..72981498, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:55002686..55002717,+#_8723413afa513aaa41c0931e096ed76a | p@chr7:55002686..55002717, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:122422716..122422728,-#_8723413afa513aaa41c0931e096ed76a | p15@Rimklb |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42537176..42537182,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42537176..42537182, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:96752893..96752921,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:96752893..96752921, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42551615..42551622,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42551615..42551622, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42535984..42535996,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42535984..42535996, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:20188864..20188875,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:20188864..20188875, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42547375..42547383,-#_8723413afa513aaa41c0931e096ed76a | p10@Fam115e |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:75355747..75355754,-#_8723413afa513aaa41c0931e096ed76a | p@chr10:75355747..75355754, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42535901..42535907,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42535901..42535907, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:93026806..93026816,-#_8723413afa513aaa41c0931e096ed76a | p12@Ston2 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:114453231..114453265,-#_8723413afa513aaa41c0931e096ed76a | p@chr12:114453231..114453265, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:33251992..33251995,+#_8723413afa513aaa41c0931e096ed76a | p@chr5:33251992..33251995, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:20186617..20186622,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:20186617..20186622, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:55028223..55028250,+#_8723413afa513aaa41c0931e096ed76a | p@chr7:55028223..55028250, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:54242736..54242738,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:54242736..54242738, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42535216..42535225,+#_8723413afa513aaa41c0931e096ed76a | p@chr6:42535216..42535225, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42551615..42551622,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42551615..42551622, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:122970904..122970907,-#_8723413afa513aaa41c0931e096ed76a | p@chr9:122970904..122970907, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:11353179..11353189,-#_8723413afa513aaa41c0931e096ed76a | p@chr19:11353179..11353189, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:122422716..122422728,-#_8723413afa513aaa41c0931e096ed76a | p15@Rimklb |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42536009..42536044,+#_8723413afa513aaa41c0931e096ed76a | p@chr6:42536009..42536044, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42547300..42547314,-#_8723413afa513aaa41c0931e096ed76a | p7@Fam115e |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42535739..42535752,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42535739..42535752, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:75093379..75093383,+#_8723413afa513aaa41c0931e096ed76a | p@chrX:75093379..75093383, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:57320631..57320636,-#_8723413afa513aaa41c0931e096ed76a | p5@Fam114a2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:55008002..55008008,-#_8723413afa513aaa41c0931e096ed76a | p@chr7:55008002..55008008, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:137642090..137642093,-#_8723413afa513aaa41c0931e096ed76a | p8@Col4a6 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:22342065..22342073,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:22342065..22342073, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42539787..42539797,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42539787..42539797, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42536469..42536478,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42536469..42536478, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:7867982..7867988,-#_8723413afa513aaa41c0931e096ed76a | p@chr9:7867982..7867988, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42551847..42551862,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42551847..42551862, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:7699504..7699515,+#_8723413afa513aaa41c0931e096ed76a | p@chr9:7699504..7699515, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:102102677..102102684,+#_8723413afa513aaa41c0931e096ed76a | p@chr4:102102677..102102684, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:75355747..75355754,-#_8723413afa513aaa41c0931e096ed76a | p@chr10:75355747..75355754, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:37769602..37769611,-#_8723413afa513aaa41c0931e096ed76a | p@chr1:37769602..37769611, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42536000..42536005,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42536000..42536005, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:20188882..20188884,+#_8723413afa513aaa41c0931e096ed76a | p@chr16:20188882..20188884, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42547389..42547396,-#_8723413afa513aaa41c0931e096ed76a | p14@Fam115e |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:36341608..36341609,-#_8723413afa513aaa41c0931e096ed76a | p@chr9:36341608..36341609, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:22342065..22342073,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:22342065..22342073, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:42541927..42541932,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42541927..42541932, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:42543450..42543455,-#_8723413afa513aaa41c0931e096ed76a | p@chr6:42543450..42543455, - |
