Personal tools

UBERON:0005062: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=neural fold
|name=neural fold
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0005061
|part_of=UBERON:0005061

Latest revision as of 17:50, 12 September 2014

Name:neural fold
Namespace:FANTOM
Definition:"One of the two elevated edges of the neural groove." [GO:0001842, MP:0011256]
Xrefs:
links:

EHDAA2:0001249
EMAPA:16090
EMAPA:16093
EMAPA:16142
EMAPA:16146
EMAPA:16151
EMAPA:16155
EMAPA:16159
EMAPA:16162
EMAPA:16288
EMAPA:16292
EMAPA:16295
EMAPA:16299
EMAPA:16303
EMAPA:16307
EMAPA:16528
ncithesaurus:Neural_Fold
SCTID:361461009

XAO:0004087
Synonyms: "medullary fold" EXACT [MP:0011256]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005157(epithelial fold),UBERON:0005291(embryonic tissue),UBERON:0010371(ecto-epithelium),UBERON:0015212(lateral structure)
part_of:UBERON:0005061(neural groove)



Children

develops from:UBERON:0002342 (neural crest)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005062 (neural fold), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data