UBERON:0006444: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A ring of fibrous or fibrocartilaginous tissue (as of an intervertebral disk or surrounding an orifice of the heart)." [BTO:0003627] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006444 | |||
|is_a=UBERON:0001995 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=annulus fibrosus | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="anulus fibrosus" EXACT [FMA:76704];;"fibrous ring" RELATED [BTO:0003627] | ||
|union_of= | |||
|xref=BTO:0003627;;FMA:76704 | |||
}} | }} | ||
Latest revision as of 17:57, 12 September 2014
| Name: | annulus fibrosus | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A ring of fibrous or fibrocartilaginous tissue (as of an intervertebral disk or surrounding an orifice of the heart)." [BTO:0003627] | ||
| Xrefs: |
| ||
| Synonyms: |
"anulus fibrosus" EXACT [FMA:76704] "fibrous ring" RELATED [BTO:0003627] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001995(fibrocartilage) |
|---|
Children
| is a: | UBERON:0004715 (annulus fibrosus disci intervertebralis) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11463-119B5 (Anulus Pulposus Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006444 (annulus fibrosus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.68e-99 | FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_21604ce3fe01ebde53807ed2954a2b8f | p5@PTGFR |
| 5.68e-99 | FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_21604ce3fe01ebde53807ed2954a2b8f | p5@PTGFR |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_b10ebeb6efc4a01e8b7f222fcb7c668c | p@chr13:24914614..24914622, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_b10ebeb6efc4a01e8b7f222fcb7c668c | p@chr13:24914614..24914622, - |
| 2.34e-79 | FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_2e01f8d9b52f024bdb9c32b4630af6df | p@chr9:114135497..114135526, - |
| 2.34e-79 | FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_2e01f8d9b52f024bdb9c32b4630af6df | p@chr9:114135497..114135526, - |
| 1.45e-66 | FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_4efcf85c88f4b4e61c26d9dc02c7ed1b | p@chr3:174737010..174737023, + |
| 1.45e-66 | FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_4efcf85c88f4b4e61c26d9dc02c7ed1b | p@chr3:174737010..174737023, + |
| 2.84e-66 | FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_6832f1467197eddd31e6790fc3affe56 | p@chr2:241897189..241897221, - |
| 2.84e-66 | FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_6832f1467197eddd31e6790fc3affe56 | p@chr2:241897189..241897221, - |
| 1.13e-57 | FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_70f922ace3b6c636b7950c10da4852d1 | p4@PAX1 |
| 1.13e-57 | FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_70f922ace3b6c636b7950c10da4852d1 | p@chr10:81923378..81923389, - |
| 1.13e-57 | FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_70f922ace3b6c636b7950c10da4852d1 | p4@PAX1 |
| 1.13e-57 | FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_70f922ace3b6c636b7950c10da4852d1 | p3@PAX1 |
| 1.13e-57 | FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_70f922ace3b6c636b7950c10da4852d1 | p3@PAX1 |
| 1.13e-57 | FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_70f922ace3b6c636b7950c10da4852d1 | p@chr10:81923378..81923389, - |
| 1.14e-50 | FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_8134bdbd1ae524defe6790f9c7bf0a96 | p3@NKX3-2 |
| 1.14e-50 | FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_8134bdbd1ae524defe6790f9c7bf0a96 | p3@NKX3-2 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_a1090f3428529dd15885075c336c320e | p4@NKX3-2 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_a1090f3428529dd15885075c336c320e | p4@NKX3-2 |
| 2.74e-50 | FFCP PHASE2:Hg19::chr16:4421890..4421912,-#_3a97d22324487cfd8f9004b12147752f | p@chr16:4421890..4421912, - |
| 2.74e-50 | FFCP PHASE1:Hg19::chr16:4421890..4421912,-#_3a97d22324487cfd8f9004b12147752f | p@chr16:4421890..4421912, - |
| 3.19e-45 | FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_591420fee057b95f7c1e630928a25a87 | p@chr2:241897125..241897142, - |
| 3.19e-45 | FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_591420fee057b95f7c1e630928a25a87 | p@chr2:241897125..241897142, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_8c413a6ca3adcc91f48e83eb1e111266 | p@chr3:80727046..80727051, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_8c413a6ca3adcc91f48e83eb1e111266 | p@chr3:80727046..80727051, - |
| 5.99e-41 | FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_f610050908108b660bfe44351f10c5c5 | p@chr5:30104176..30104187, - |
| 5.99e-41 | FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_f610050908108b660bfe44351f10c5c5 | p@chr5:30104176..30104187, - |
| 3.01e-40 | FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_9892f4753aac078e8d31f9293a448b59 | p@chr1:19778678..19778689, - |
| 3.01e-40 | FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_9892f4753aac078e8d31f9293a448b59 | p@chr1:19778678..19778689, - |
| 1.3e-37 | FFCP PHASE2:Hg19::chr20:21695435..21695452,+#_523b806559f2d7f406fffb2c1392abce | p@chr20:21695435..21695452, + |
| 1.3e-37 | FFCP PHASE1:Hg19::chr20:21695435..21695452,+#_523b806559f2d7f406fffb2c1392abce | p@chr20:21695435..21695452, + |
| 3.94e-37 | FFCP PHASE1:Hg19::chr16:70795228..70795237,+#_6e7aa267cd8b5b9a8b7b0d5f1c98b59f | p@chr16:70795228..70795237, + |
| 3.94e-37 | FFCP PHASE2:Hg19::chr16:70795228..70795237,+#_6e7aa267cd8b5b9a8b7b0d5f1c98b59f | p@chr16:70795228..70795237, + |
| 8.2e-37 | FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_4e4e0025ab4e87a6e4e74930f4221447 | p1@uc010aki.1 |
| 8.2e-37 | FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_4e4e0025ab4e87a6e4e74930f4221447 | p1@uc010aki.1 |
| 1.18e-36 | FFCP PHASE2:Hg19::chr8:27455513..27455516,+#_6c6534e635d82413918e8a505322db9f | p7@CU679734 |
| 1.18e-36 | FFCP PHASE1:Hg19::chr8:27455513..27455516,+#_6c6534e635d82413918e8a505322db9f | p7@CU679734 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_5743e18123be684ddc1ded2140ef8151 | p3@uc010aki.1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_5743e18123be684ddc1ded2140ef8151 | p3@uc010aki.1 |
| 8.05e-30 | FFCP PHASE2:Hg19::chr11:66724317..66724340,-#_98d2c30271a20a59b2c503d7f5691023 | p@chr11:66724317..66724340, - |
| 8.05e-30 | FFCP PHASE1:Hg19::chr11:66724317..66724340,-#_98d2c30271a20a59b2c503d7f5691023 | p@chr11:66724317..66724340, - |
| 2.22e-29 | FFCP PHASE2:Hg19::chr2:53161632..53161661,-#_4c8ccaaa322e3ecc4c335c201b23e5f1 | p@chr2:53161632..53161661, - |
| 2.22e-29 | FFCP PHASE1:Hg19::chr2:53161632..53161661,-#_4c8ccaaa322e3ecc4c335c201b23e5f1 | p@chr2:53161632..53161661, - |
| 5.41e-28 | FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_6a080d248688a14ca3617bbfd3c5b6cf | p15@SNED1 |
| 5.41e-28 | FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_6a080d248688a14ca3617bbfd3c5b6cf | p15@SNED1 |
| 7.1e-28 | FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_d9a192ae0e890e5459ced5742834a965 | p20@CAPZB |
| 7.1e-28 | FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_d9a192ae0e890e5459ced5742834a965 | p20@CAPZB |
| 2.09e-27 | FFCP PHASE1:Hg19::chr8:25337491..25337504,+#_e2b49113d9e182dd25a96222262ed834 | p@chr8:25337491..25337504, + |
| 2.09e-27 | FFCP PHASE2:Hg19::chr8:25337491..25337504,+#_e2b49113d9e182dd25a96222262ed834 | p@chr8:25337491..25337504, + |
| 3.59e-26 | FFCP PHASE2:Hg19::chr2:241897363..241897398,+#_14954c12d4b3124d60c7d1b235964dd5 | p@chr2:241897363..241897398, + |
| 3.59e-26 | FFCP PHASE1:Hg19::chr2:241897363..241897398,+#_14954c12d4b3124d60c7d1b235964dd5 | p@chr2:241897363..241897398, + |
| 3.89e-25 | FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_b94e9c67a7dc9cb66c25e34419f38fa6 | p10@SYNJ2 |
| 3.89e-25 | FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_b94e9c67a7dc9cb66c25e34419f38fa6 | p10@SYNJ2 |
| 5.58e-25 | FFCP PHASE2:Hg19::chr7:18832801..18832816,+#_26e3be4db6108cc08d0e003a16d5e94c | p21@HDAC9 |
| 5.58e-25 | FFCP PHASE1:Hg19::chr7:18832801..18832816,+#_26e3be4db6108cc08d0e003a16d5e94c | p21@HDAC9 |
| 1.02e-24 | FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_ed2ac0bd9f5d4c9682ca7f6bcb33b542 | p@chr9:16138889..16138902, - |
| 1.02e-24 | FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_ed2ac0bd9f5d4c9682ca7f6bcb33b542 | p@chr9:16138889..16138902, - |
| 1.45e-24 | FFCP PHASE2:Hg19::chr2:241938405..241938416,+#_5f97b5cba4f597355811a582a47d0e48 | p@chr2:241938405..241938416, + |
| 1.45e-24 | FFCP PHASE1:Hg19::chr2:241938405..241938416,+#_5f97b5cba4f597355811a582a47d0e48 | p@chr2:241938405..241938416, + |
| 2.34e-24 | FFCP PHASE2:Hg19::chr8:78311303..78311320,+#_72f2e95ff5a6fa751cd3777173ed5729 | p2@ENST00000518706 |
| 2.34e-24 | FFCP PHASE1:Hg19::chr8:78311303..78311320,+#_72f2e95ff5a6fa751cd3777173ed5729 | p2@ENST00000518706 |
| 6.77e-24 | FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_924e729fbf699b96e93108141fb73946 | p1@ENST00000436845 |
| 6.77e-24 | FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_924e729fbf699b96e93108141fb73946 | p1@ENST00000436845 |
| 8.02e-24 | FFCP PHASE2:Hg19::chr17:38655950..38655954,+#_ca67fedea458b165b28e7ed591e89f6c | p@chr17:38655950..38655954, + |
| 8.02e-24 | FFCP PHASE1:Hg19::chr17:38655950..38655954,+#_ca67fedea458b165b28e7ed591e89f6c | p@chr17:38655950..38655954, + |
| 1.13e-23 | FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_1a61706906ca3677b742a30e27d19196 | p6@SIX4 |
| 1.13e-23 | FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_1a61706906ca3677b742a30e27d19196 | p6@SIX4 |
| 1.78e-23 | FFCP PHASE2:Hg19::chr1:78695298..78695311,+#_371b1d85cd8a9e685424322e6c80ccde | p1@ENST00000413519 |
| 1.78e-23 | FFCP PHASE1:Hg19::chr1:78695298..78695311,+#_371b1d85cd8a9e685424322e6c80ccde | p1@ENST00000413519 |
| 1.14e-21 | FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_b42d38430e474c8e6caeb4dd72fabe51 | p6@CCDC86 |
| 1.14e-21 | FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_b42d38430e474c8e6caeb4dd72fabe51 | p6@CCDC86 |
| 1.53e-21 | FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_c926a61f03b4ceb3c57a30fe5155cd5d | p19@HDAC9 |
| 1.53e-21 | FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_c926a61f03b4ceb3c57a30fe5155cd5d | p19@HDAC9 |
| 3.47e-21 | FFCP PHASE1:Hg19::chr20:30181389..30181408,+#_0ca20d456421fd27f5fcdaa410590804 | p@chr20:30181389..30181408, + |
| 3.47e-21 | FFCP PHASE2:Hg19::chr20:30181389..30181408,+#_0ca20d456421fd27f5fcdaa410590804 | p@chr20:30181389..30181408, + |
| 3.81e-21 | FFCP PHASE1:Hg19::chr3:158384350..158384362,-#_ba1f8a8dd23ec1725e8d0ec349a48990 | p@chr3:158384350..158384362, - |
| 3.81e-21 | FFCP PHASE2:Hg19::chr3:158384350..158384362,-#_ba1f8a8dd23ec1725e8d0ec349a48990 | p@chr3:158384350..158384362, - |
| 4.66e-21 | FFCP PHASE2:Hg19::chr18:12012068..12012098,+#_68b4149a60d3e9692e3e2f932078a383 | p@chr18:12012068..12012098, + |
| 4.66e-21 | FFCP PHASE1:Hg19::chr18:12012068..12012098,+#_68b4149a60d3e9692e3e2f932078a383 | p@chr18:12012068..12012098, + |
| 5.2e-21 | FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_c7064eb57aee79fa8a0d72592510f289 | p@chr7:158224707..158224729, - |
| 5.2e-21 | FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_c7064eb57aee79fa8a0d72592510f289 | p@chr7:158224707..158224729, - |
| 6.96e-21 | FFCP PHASE2:Hg19::chr11:108743668..108743675,+#_ff3e59fbc00b7bdb4cfd0b26242485d6 | p@chr11:108743668..108743675, + |
| 6.96e-21 | FFCP PHASE1:Hg19::chr11:108743668..108743675,+#_ff3e59fbc00b7bdb4cfd0b26242485d6 | p@chr11:108743668..108743675, + |
| 6.96e-21 | FFCP PHASE2:Hg19::chr2:158345440..158345449,-#_ff3e59fbc00b7bdb4cfd0b26242485d6 | p9@CYTIP |
| 6.96e-21 | FFCP PHASE1:Hg19::chr2:158345440..158345449,-#_ff3e59fbc00b7bdb4cfd0b26242485d6 | p9@CYTIP |
| 8.49e-21 | FFCP PHASE2:Hg19::chr6:158490395..158490407,+#_56fba48e7723f11a9722762d92a1133f | p9@SYNJ2 |
| 8.49e-21 | FFCP PHASE1:Hg19::chr6:158490395..158490407,+#_56fba48e7723f11a9722762d92a1133f | p9@SYNJ2 |
| 2.74e-20 | FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_6b6237faab533e417a0217ece3baaf4a | p@chr1:65888177..65888194, + |
| 2.74e-20 | FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_6b6237faab533e417a0217ece3baaf4a | p@chr1:65888177..65888194, + |
| 1.64e-19 | FFCP PHASE2:Hg19::chr19:14223369..14223385,-#_8510f44f86cc0d782607792b58df8e4f | p5@PRKACA |
| 1.64e-19 | FFCP PHASE1:Hg19::chr19:14223369..14223385,-#_8510f44f86cc0d782607792b58df8e4f | p5@PRKACA |
| 2.38e-19 | FFCP PHASE2:Hg19::chr9:113798560..113798572,-#_923247ddaaede1fbec2910e2ff9cc212 | p34@LPAR1 |
| 2.38e-19 | FFCP PHASE1:Hg19::chr9:113798560..113798572,-#_923247ddaaede1fbec2910e2ff9cc212 | p34@LPAR1 |
| 4.53e-19 | FFCP PHASE2:Hg19::chr17:73688878..73688882,+#_51010a45bdd7a3d5a7ea6346ff73c153 | p@chr17:73688878..73688882, + |
| 4.53e-19 | FFCP PHASE1:Hg19::chr17:73688878..73688882,+#_51010a45bdd7a3d5a7ea6346ff73c153 | p@chr17:73688878..73688882, + |
| 6.53e-19 | FFCP PHASE2:Hg19::chr3:58572689..58572703,-#_76afde844d43351dee84c496bfc6ad9b | p6@FAM107A |
| 6.53e-19 | FFCP PHASE1:Hg19::chr3:58572689..58572703,-#_76afde844d43351dee84c496bfc6ad9b | p6@FAM107A |
| 7.03e-19 | FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_a59cd52a7b8c3a4f08a1bc9e00b381ba | p1@MGC27382 |
| 7.03e-19 | FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_a59cd52a7b8c3a4f08a1bc9e00b381ba | p1@MGC27382 |
