Personal tools

UBERON:0010141: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0010141 |name=primitive sex cord of indifferent gonad |namespace= |def= |xref=EHDAA2:0004051 |is_a=UBERON:0004909;;UBERON:0005295 |synonym="indiffer...")
 
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0010141
|alt_id=
|name=primitive sex cord of indifferent gonad
|namespace=
|def=
|xref=EHDAA2:0004051
|is_a=UBERON:0004909;;UBERON:0005295
|synonym="indifferent sex cord" EXACT [];;"primitive sex cords" EXACT [EHDAA2:0004051]
|comment=Usage notes: note that this represents the indifferent structure.
|comment=Usage notes: note that this represents the indifferent structure.
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0005891
|develops_from=UBERON:0005891
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010141
|is_a=UBERON:0004909 ;;UBERON:0005295
|is_obsolete=
|located_in=
|located_in=
|name=primitive sex cord of indifferent gonad
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0009117
|part_of=UBERON:0009117
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="indifferent sex cord" EXACT [];;"primitive sex cords" EXACT [EHDAA2:0004051]
|union_of=
|xref=EHDAA2:0004051
}}
}}

Latest revision as of 18:08, 12 September 2014

Name:primitive sex cord of indifferent gonad
Namespace:FANTOM
Xrefs:
links:
EHDAA2:0004051
Synonyms: "indifferent sex cord" EXACT []
"primitive sex cords" EXACT [EHDAA2:0004051]
Comments:Usage notes: note that this represents the indifferent structure.

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004909(epithelium of gonad),UBERON:0005295(sex cord)
develops_from:UBERON:0005891(coelomic epithelium)
part_of:UBERON:0009117(indifferent gonad)



Children

develops from:UBERON:0005297 (testis sex cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010141 (primitive sex cord of indifferent gonad), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data