UBERON:0010260: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0010260
|name=umbilical blood vessel
|namespace=
|def=
|xref=
|is_a=UBERON:0001981
|synonym="umbilical cord blood vessel" EXACT []
|comment=
|alt_...") |
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{{UBERON | {{UBERON | ||
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|id=UBERON:0010260 | |||
|is_a=UBERON:0001981 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=umbilical blood vessel | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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| | |synonym="umbilical cord blood vessel" EXACT [] | ||
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Latest revision as of 18:08, 12 September 2014
| Name: | umbilical blood vessel |
|---|---|
| Namespace: | FANTOM |
| Synonyms: | "umbilical cord blood vessel" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001981(blood vessel) |
|---|
Children
| is a: | UBERON:0001310 (umbilical artery),UBERON:0002066 (umbilical vein) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11367-117I8 (Smooth Muscle Cells - Umbilical Artery, donor2)
- 11400-118D5 (Endothelial Cells - Umbilical vein, donor3)
- 11439-118H8 (Smooth Muscle Cells - Umbilical Artery, donor3)
- 11541-120B2 (Smooth Muscle Cells - Umbilical Vein, donor1)
- 11621-122B1 (Smooth Muscle Cells - Umbilical Vein, donor2)
- 11702-123B1 (Smooth Muscle Cells - Umbilical Vein, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010260 (umbilical blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
