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{{UBERON
{{UBERON
|id=UBERON:0010758
|alt_id=
|name=appendage segment
|namespace=
|def=
|xref=FBbt:00007018
|is_a=UBERON:0000475
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010758
|is_a=UBERON:0000475
|is_obsolete=
|located_in=
|located_in=
|name=subdivision of organism along appendicular axis
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000026
|part_of=UBERON:0000026
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FBbt:00007018
}}
}}

Latest revision as of 18:09, 12 September 2014

Name:subdivision of organism along appendicular axis
Namespace:FANTOM
Xrefs:
links:
FBbt:00007018

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000475(organism subdivision)
part_of:UBERON:0000026(appendage)



Children

is a:UBERON:0006058 (multi-limb segment region),UBERON:0010538 (paired limb/fin segment)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010758 (subdivision of organism along appendicular axis), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data