UBERON:0010890: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=pelvic complex muscle | |name=pelvic complex muscle | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0010709;;UBERON:0014792 | |part_of=UBERON:0010709;;UBERON:0014792 | ||
Latest revision as of 18:10, 12 September 2014
| Name: | pelvic complex muscle | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Muscles of the pelvic girdle, hindlimb or pelvic fin." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: |
"lower limb muscle" RELATED INCONSISTENT [FMA:9622] "muscle of lower limb" RELATED INCONSISTENT [FMA:9622] "pelvic girdle or hind limb muscle" NARROW [UBERON:cjm] "pelvic girdle or posterior limb muscle" NARROW [UBERON:cjm] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0014892(skeletal muscle organ) |
|---|---|
| part_of: | UBERON:0010709(pelvic complex),UBERON:0014792(musculature of pelvic complex) |
Children
| is a: | UBERON:0014795 (pelvic appendage muscle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10264-104D3
- 10281-104F2
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10309-104I3
- 10310-104I4
- 10320-105A5
- 10337-105C4
- 10338-105C5
- 1389-42C2 (muscle (biceps femoris), neonate N30)
Mouse (Mus musculus)
- 10264-104D3
- 10281-104F2
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10309-104I3
- 10310-104I4
- 10320-105A5
- 10337-105C4
- 10338-105C5
- 1389-42C2 (muscle (biceps femoris), neonate N30)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010890 (pelvic complex muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_15333a85a2894ca74b9225c014f45684 | p@chr2:179396370..179396375, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_15333a85a2894ca74b9225c014f45684 | p@chr2:76859417..76859418, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_15333a85a2894ca74b9225c014f45684 | p@chr11:3691037..3691040, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_15333a85a2894ca74b9225c014f45684 | p@chr4:186423235..186423240, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_15333a85a2894ca74b9225c014f45684 | p@chr22:25535147..25535150, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_15333a85a2894ca74b9225c014f45684 | p@chr4:85166508..85166512, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_15333a85a2894ca74b9225c014f45684 | p@chr10:79759687..79759690, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_15333a85a2894ca74b9225c014f45684 | p@chr7:128483294..128483304, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_15333a85a2894ca74b9225c014f45684 | p@chr2:179396370..179396375, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_15333a85a2894ca74b9225c014f45684 | p@chr10:97176812..97176813, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_15333a85a2894ca74b9225c014f45684 | p@chr2:76859417..76859418, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_15333a85a2894ca74b9225c014f45684 | p@chr11:3691037..3691040, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_15333a85a2894ca74b9225c014f45684 | p@chr4:85166508..85166512, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_15333a85a2894ca74b9225c014f45684 | p@chr7:128483294..128483304, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_15333a85a2894ca74b9225c014f45684 | p@chr4:186423235..186423240, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_15333a85a2894ca74b9225c014f45684 | p@chr22:25535147..25535150, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_15333a85a2894ca74b9225c014f45684 | p@chr10:79759687..79759690, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_15333a85a2894ca74b9225c014f45684 | p@chr10:97176812..97176813, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152553958..152553964, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr22:36000901..36000903, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr5:175125123..175125125, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_23bfa4eaf25b34638b043766ba821b56 | p77@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr5:137206180..137206187, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr8:144542829..144542857, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr1:145478051..145478060, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr8:144542829..144542857, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_23bfa4eaf25b34638b043766ba821b56 | p46@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:179399371..179399376, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152534468..152534476, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr5:172318159..172318160, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr15:51060095..51060101, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152525581..152525588, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_23bfa4eaf25b34638b043766ba821b56 | p54@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr3:188070178..188070183, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr13:114067922..114067931, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr13:51335579..51335582, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr1:145478051..145478060, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_23bfa4eaf25b34638b043766ba821b56 | p93@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:179514306..179514308, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_23bfa4eaf25b34638b043766ba821b56 | p104@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr5:117747577..117747580, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152499727..152499734, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_23bfa4eaf25b34638b043766ba821b56 | p7@FLJ36848 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr6:33716557..33716600, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152553958..152553964, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_23bfa4eaf25b34638b043766ba821b56 | p1@ENST00000430244, p1@uc003tvu.2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr22:36000901..36000903, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_23bfa4eaf25b34638b043766ba821b56 | p77@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_23bfa4eaf25b34638b043766ba821b56 | p108@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152520248..152520253, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_23bfa4eaf25b34638b043766ba821b56 | p46@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:179399371..179399376, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152525581..152525588, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr5:175125123..175125125, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr5:137206180..137206187, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_23bfa4eaf25b34638b043766ba821b56 | p54@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr1:119487319..119487331, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr5:172318159..172318160, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152534468..152534476, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:179514306..179514308, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_23bfa4eaf25b34638b043766ba821b56 | p104@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr13:51335579..51335582, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr15:51060095..51060101, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152499727..152499734, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_23bfa4eaf25b34638b043766ba821b56 | p7@FLJ36848 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr6:33716557..33716600, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_23bfa4eaf25b34638b043766ba821b56 | p1@ENST00000430244, p1@uc003tvu.2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_23bfa4eaf25b34638b043766ba821b56 | p108@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr3:188070178..188070183, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr13:114067922..114067931, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr2:152520248..152520253, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_23bfa4eaf25b34638b043766ba821b56 | p@chr1:119487319..119487331, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_23bfa4eaf25b34638b043766ba821b56 | p93@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_23bfa4eaf25b34638b043766ba821b56 | p@chr5:117747577..117747580, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:125535391..125535409,+#_6553c1f07298d210cf96340082578b05 | p@chr6:125535391..125535409, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:46924232..46924241,+#_6553c1f07298d210cf96340082578b05 | p@chr3:46924232..46924241, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr21:47769234..47769239,+#_6553c1f07298d210cf96340082578b05 | p@chr21:47769234..47769239, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_6553c1f07298d210cf96340082578b05 | p@chr10:29918007..29918031, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:152590465..152590472,-#_6553c1f07298d210cf96340082578b05 | p@chr2:152590465..152590472, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_6553c1f07298d210cf96340082578b05 | p@chr12:69653866..69653876, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:168102459..168102468,+#_6553c1f07298d210cf96340082578b05 | p73@XIRP2 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_6553c1f07298d210cf96340082578b05 | p@chr22:26299595..26299605, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:152566311..152566321,-#_6553c1f07298d210cf96340082578b05 | p@chr2:152566311..152566321, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_6553c1f07298d210cf96340082578b05 | p@chr2:179656442..179656451, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr10:29918007..29918031,-#_6553c1f07298d210cf96340082578b05 | p@chr10:29918007..29918031, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_6553c1f07298d210cf96340082578b05 | p@chr3:69168368..69168389, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr10:97037060..97037066,-#_6553c1f07298d210cf96340082578b05 | p@chr10:97037060..97037066, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:95180155..95180172,+#_6553c1f07298d210cf96340082578b05 | p@chr5:95180155..95180172, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_6553c1f07298d210cf96340082578b05 | p38@CLIP1 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:122884464..122884467,-#_6553c1f07298d210cf96340082578b05 | p38@CLIP1 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr21:47769234..47769239,+#_6553c1f07298d210cf96340082578b05 | p@chr21:47769234..47769239, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_6553c1f07298d210cf96340082578b05 | p@chr3:35732964..35732965, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_6553c1f07298d210cf96340082578b05 | p@chr12:69653866..69653876, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_6553c1f07298d210cf96340082578b05 | p27@CLIP4 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:152590465..152590472,-#_6553c1f07298d210cf96340082578b05 | p@chr2:152590465..152590472, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:102079632..102079647,-#_6553c1f07298d210cf96340082578b05 | p@chr12:102079632..102079647, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:8608021..8608050,+#_6553c1f07298d210cf96340082578b05 | p@chr18:8608021..8608050, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:125535391..125535409,+#_6553c1f07298d210cf96340082578b05 | p@chr6:125535391..125535409, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:102079632..102079647,-#_6553c1f07298d210cf96340082578b05 | p@chr12:102079632..102079647, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:46924232..46924241,+#_6553c1f07298d210cf96340082578b05 | p@chr3:46924232..46924241, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
