UBERON:0011139: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=Most limb joints are synovial, but a few such as the tibiofibular joints are syndesmoses. | |comment=Most limb joints are synovial, but a few such as the tibiofibular joints are syndesmoses. | ||
|created_by= | |created_by= | ||
| | |def="Any synovial joint that is part of a (free) limb." [UBERON:cjm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0011139 | |||
|is_a=UBERON:0002217 ;;UBERON:0003657 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=synovial limb joint | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002101 | |part_of=UBERON:0002101 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="synovial joint of free limb segment" EXACT [FMA:258776] | ||
|union_of= | |||
|xref=FMA:258776 | |||
}} | }} | ||
Latest revision as of 18:10, 12 September 2014
| Name: | synovial limb joint | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Any synovial joint that is part of a (free) limb." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: | "synovial joint of free limb segment" EXACT [FMA:258776] | ||
| Comments: | Most limb joints are synovial, but a few such as the tibiofibular joints are syndesmoses. |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002217(synovial joint),UBERON:0003657(limb joint) |
|---|---|
| part_of: | UBERON:0002101(limb) |
Children
| is a: | UBERON:0001485 (knee joint) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10267-104D6
- 10295-104G7 (cruciate ligament, donor2)
- 10323-105A8
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011139 (synovial limb joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
