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{{UBERON
{{UBERON
|id=UBERON:0011158
|alt_id=
|name=primary subdivision of skull
|namespace=
|def="The skull can be divided into two: the neurocranium and the facial skeleton" []
|xref=FMA:54964
|is_a=UBERON:0000075
|synonym="skull subdivision" EXACT [FMA:54964];;"subdivision of skull" EXACT [FMA:54964]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The skull can be divided into two: the neurocranium and the facial skeleton" []
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0011158
|is_a=UBERON:0000075
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=primary subdivision of skull
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003129
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="skull subdivision" EXACT [FMA:54964];;"subdivision of skull" EXACT [FMA:54964]
|union_of=
|xref=FMA:54964
}}
}}

Latest revision as of 18:10, 12 September 2014

Name:primary subdivision of skull
Namespace:FANTOM
Definition:"The skull can be divided into two: the neurocranium and the facial skeleton" []
Xrefs:
links:
FMA:54964
Synonyms: "skull subdivision" EXACT [FMA:54964]
"subdivision of skull" EXACT [FMA:54964]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000075(subdivision of skeletal system)
part_of:UBERON:0003129(skull)



Children

is a:UBERON:0001703 (neurocranium),UBERON:0011156 (facial skeleton)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011158 (primary subdivision of skull), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_e3d22b2f1308549011ceff08869d1682p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_e3d22b2f1308549011ceff08869d1682p2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_e3d22b2f1308549011ceff08869d1682p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_e3d22b2f1308549011ceff08869d1682p1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_e3d22b2f1308549011ceff08869d1682p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_e3d22b2f1308549011ceff08869d1682p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_e3d22b2f1308549011ceff08869d1682p6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_e3d22b2f1308549011ceff08869d1682p2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_e3d22b2f1308549011ceff08869d1682p@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_e3d22b2f1308549011ceff08869d1682p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_e3d22b2f1308549011ceff08869d1682p2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_e3d22b2f1308549011ceff08869d1682p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_e3d22b2f1308549011ceff08869d1682p10@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_e3d22b2f1308549011ceff08869d1682p@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_e3d22b2f1308549011ceff08869d1682p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_e3d22b2f1308549011ceff08869d1682p4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_e3d22b2f1308549011ceff08869d1682p@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_e3d22b2f1308549011ceff08869d1682p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_e3d22b2f1308549011ceff08869d1682p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_e3d22b2f1308549011ceff08869d1682p5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_e3d22b2f1308549011ceff08869d1682p1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_e3d22b2f1308549011ceff08869d1682p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_e3d22b2f1308549011ceff08869d1682p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_e3d22b2f1308549011ceff08869d1682p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_e3d22b2f1308549011ceff08869d1682p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_e3d22b2f1308549011ceff08869d1682p@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_e3d22b2f1308549011ceff08869d1682p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_e3d22b2f1308549011ceff08869d1682p@chr3:58626291..58626298, -
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_e3d22b2f1308549011ceff08869d1682p11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_e3d22b2f1308549011ceff08869d1682p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_e3d22b2f1308549011ceff08869d1682p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_e3d22b2f1308549011ceff08869d1682p3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_e3d22b2f1308549011ceff08869d1682p1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_e3d22b2f1308549011ceff08869d1682p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_e3d22b2f1308549011ceff08869d1682p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_e3d22b2f1308549011ceff08869d1682p7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_e3d22b2f1308549011ceff08869d1682p5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_e3d22b2f1308549011ceff08869d1682p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_e3d22b2f1308549011ceff08869d1682p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_e3d22b2f1308549011ceff08869d1682p@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_e3d22b2f1308549011ceff08869d1682p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_e3d22b2f1308549011ceff08869d1682p6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_e3d22b2f1308549011ceff08869d1682p1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_e3d22b2f1308549011ceff08869d1682p9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_e3d22b2f1308549011ceff08869d1682p2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_e3d22b2f1308549011ceff08869d1682p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_e3d22b2f1308549011ceff08869d1682p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_e3d22b2f1308549011ceff08869d1682p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_e3d22b2f1308549011ceff08869d1682p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_e3d22b2f1308549011ceff08869d1682p21@Espn
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_e3d22b2f1308549011ceff08869d1682p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_e3d22b2f1308549011ceff08869d1682p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_e3d22b2f1308549011ceff08869d1682p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_e3d22b2f1308549011ceff08869d1682p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_e3d22b2f1308549011ceff08869d1682p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_e3d22b2f1308549011ceff08869d1682p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_e3d22b2f1308549011ceff08869d1682p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_e3d22b2f1308549011ceff08869d1682p1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_e3d22b2f1308549011ceff08869d1682p@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_e3d22b2f1308549011ceff08869d1682p2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_e3d22b2f1308549011ceff08869d1682p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_e3d22b2f1308549011ceff08869d1682p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_e3d22b2f1308549011ceff08869d1682p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_e3d22b2f1308549011ceff08869d1682p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_e3d22b2f1308549011ceff08869d1682p5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_e3d22b2f1308549011ceff08869d1682p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_e3d22b2f1308549011ceff08869d1682p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_e3d22b2f1308549011ceff08869d1682p3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_e3d22b2f1308549011ceff08869d1682p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_e3d22b2f1308549011ceff08869d1682p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_e3d22b2f1308549011ceff08869d1682p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_e3d22b2f1308549011ceff08869d1682p2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_e3d22b2f1308549011ceff08869d1682p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_e3d22b2f1308549011ceff08869d1682p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_e3d22b2f1308549011ceff08869d1682p7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_e3d22b2f1308549011ceff08869d1682p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_e3d22b2f1308549011ceff08869d1682p@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_e3d22b2f1308549011ceff08869d1682p4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_e3d22b2f1308549011ceff08869d1682p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_e3d22b2f1308549011ceff08869d1682p2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_e3d22b2f1308549011ceff08869d1682p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_e3d22b2f1308549011ceff08869d1682p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_e3d22b2f1308549011ceff08869d1682p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_e3d22b2f1308549011ceff08869d1682p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_e3d22b2f1308549011ceff08869d1682p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_e3d22b2f1308549011ceff08869d1682p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_e3d22b2f1308549011ceff08869d1682p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_e3d22b2f1308549011ceff08869d1682p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_e3d22b2f1308549011ceff08869d1682p6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_e3d22b2f1308549011ceff08869d1682p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_e3d22b2f1308549011ceff08869d1682p2@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_e3d22b2f1308549011ceff08869d1682p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_e3d22b2f1308549011ceff08869d1682p@chr1:78523144..78523177, +

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