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{{UBERON
{{UBERON
|id=UBERON:0011158
|alt_id=
|name=primary subdivision of skull
|namespace=
|def="The skull can be divided into two: the neurocranium and the facial skeleton" []
|xref=FMA:54964
|is_a=UBERON:0000075
|synonym="skull subdivision" EXACT [FMA:54964];;"subdivision of skull" EXACT [FMA:54964]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The skull can be divided into two: the neurocranium and the facial skeleton" []
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0011158
|is_a=UBERON:0000075
|is_obsolete=
|located_in=
|located_in=
|name=primary subdivision of skull
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003129
|part_of=UBERON:0003129
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="skull subdivision" EXACT [FMA:54964];;"subdivision of skull" EXACT [FMA:54964]
|union_of=
|xref=FMA:54964
}}
}}

Latest revision as of 18:10, 12 September 2014

Name:primary subdivision of skull
Namespace:FANTOM
Definition:"The skull can be divided into two: the neurocranium and the facial skeleton" []
Xrefs:
links:
FMA:54964
Synonyms: "skull subdivision" EXACT [FMA:54964]
"subdivision of skull" EXACT [FMA:54964]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000075(subdivision of skeletal system)
part_of:UBERON:0003129(skull)



Children

is a:UBERON:0001703 (neurocranium),UBERON:0011156 (facial skeleton)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011158 (primary subdivision of skull), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_e3d22b2f1308549011ceff08869d1682p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_e3d22b2f1308549011ceff08869d1682p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_e3d22b2f1308549011ceff08869d1682p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_e3d22b2f1308549011ceff08869d1682p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_e3d22b2f1308549011ceff08869d1682p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_e3d22b2f1308549011ceff08869d1682p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_e3d22b2f1308549011ceff08869d1682p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_e3d22b2f1308549011ceff08869d1682p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_e3d22b2f1308549011ceff08869d1682p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_e3d22b2f1308549011ceff08869d1682p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_e3d22b2f1308549011ceff08869d1682p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_e3d22b2f1308549011ceff08869d1682p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_e3d22b2f1308549011ceff08869d1682p1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_e3d22b2f1308549011ceff08869d1682p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_e3d22b2f1308549011ceff08869d1682p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_e3d22b2f1308549011ceff08869d1682p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_e3d22b2f1308549011ceff08869d1682p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_e3d22b2f1308549011ceff08869d1682p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_e3d22b2f1308549011ceff08869d1682p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_e3d22b2f1308549011ceff08869d1682p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_e3d22b2f1308549011ceff08869d1682p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_e3d22b2f1308549011ceff08869d1682p1@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_e3d22b2f1308549011ceff08869d1682p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_e3d22b2f1308549011ceff08869d1682p3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_e3d22b2f1308549011ceff08869d1682p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_e3d22b2f1308549011ceff08869d1682p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_e3d22b2f1308549011ceff08869d1682p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_e3d22b2f1308549011ceff08869d1682p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_e3d22b2f1308549011ceff08869d1682p5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_e3d22b2f1308549011ceff08869d1682p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_e3d22b2f1308549011ceff08869d1682p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_e3d22b2f1308549011ceff08869d1682p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_e3d22b2f1308549011ceff08869d1682p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_e3d22b2f1308549011ceff08869d1682p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_e3d22b2f1308549011ceff08869d1682p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_e3d22b2f1308549011ceff08869d1682p2@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_e3d22b2f1308549011ceff08869d1682p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_e3d22b2f1308549011ceff08869d1682p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_e3d22b2f1308549011ceff08869d1682p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_e3d22b2f1308549011ceff08869d1682p2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_e3d22b2f1308549011ceff08869d1682p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_e3d22b2f1308549011ceff08869d1682p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_e3d22b2f1308549011ceff08869d1682p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_e3d22b2f1308549011ceff08869d1682p2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_e3d22b2f1308549011ceff08869d1682p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_e3d22b2f1308549011ceff08869d1682p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_e3d22b2f1308549011ceff08869d1682p2@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_e3d22b2f1308549011ceff08869d1682p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_e3d22b2f1308549011ceff08869d1682p@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_e3d22b2f1308549011ceff08869d1682p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_e3d22b2f1308549011ceff08869d1682p2@Strc
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_e3d22b2f1308549011ceff08869d1682p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_e3d22b2f1308549011ceff08869d1682p@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_e3d22b2f1308549011ceff08869d1682p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_e3d22b2f1308549011ceff08869d1682p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_e3d22b2f1308549011ceff08869d1682p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_e3d22b2f1308549011ceff08869d1682p3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_e3d22b2f1308549011ceff08869d1682p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_e3d22b2f1308549011ceff08869d1682p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_e3d22b2f1308549011ceff08869d1682p4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_e3d22b2f1308549011ceff08869d1682p1@Strc
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_e3d22b2f1308549011ceff08869d1682p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_e3d22b2f1308549011ceff08869d1682p6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_e3d22b2f1308549011ceff08869d1682p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_e3d22b2f1308549011ceff08869d1682p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_e3d22b2f1308549011ceff08869d1682p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_e3d22b2f1308549011ceff08869d1682p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_e3d22b2f1308549011ceff08869d1682p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_e3d22b2f1308549011ceff08869d1682p4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_e3d22b2f1308549011ceff08869d1682p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_e3d22b2f1308549011ceff08869d1682p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_e3d22b2f1308549011ceff08869d1682p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_e3d22b2f1308549011ceff08869d1682p1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_e3d22b2f1308549011ceff08869d1682p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_e3d22b2f1308549011ceff08869d1682p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_e3d22b2f1308549011ceff08869d1682p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_e3d22b2f1308549011ceff08869d1682p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_e3d22b2f1308549011ceff08869d1682p2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_e3d22b2f1308549011ceff08869d1682p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_e3d22b2f1308549011ceff08869d1682p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_e3d22b2f1308549011ceff08869d1682p@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_e3d22b2f1308549011ceff08869d1682p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_e3d22b2f1308549011ceff08869d1682p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_e3d22b2f1308549011ceff08869d1682p41@Cacnb2
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_e3d22b2f1308549011ceff08869d1682p6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_e3d22b2f1308549011ceff08869d1682p2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_e3d22b2f1308549011ceff08869d1682p12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_e3d22b2f1308549011ceff08869d1682p11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_e3d22b2f1308549011ceff08869d1682p5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_e3d22b2f1308549011ceff08869d1682p1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_e3d22b2f1308549011ceff08869d1682p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_e3d22b2f1308549011ceff08869d1682p@chr13:43699228..43699239, +

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