FFCP PHASE1:Hg19::chr10:102729908..102729938,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK000735_5end | |||
|cluster_id=chr10:102729908..102729938,- | |||
|coexpression_cluster_id=C611 | |||
|description=CAGE_peak_2_at_AK000735_5end | |||
|id=chr10:102729908..102729938,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.93e-16;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.64e-16,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.15e-17;11!UBERON:0009497;5.43e-15;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.83e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.98e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.96e-12!115;UBERON:0000160!1.12e-09!27;UBERON:0005409!4.43e-09!35;UBERON:0002298!8.96e-09!8;UBERON:0001155!1.48e-08!9;UBERON:0005172!6.71e-08!55;UBERON:0005173!6.71e-08!55;UBERON:0000481!1.59e-07!347;UBERON:0004921!1.71e-07!129;UBERON:0004185!1.71e-07!129;UBERON:0001007!2.93e-07!155;UBERON:0001555!2.93e-07!155;UBERON:0007026!2.93e-07!155;UBERON:0000059!5.30e-07!11;UBERON:0009854!6.40e-07!23;UBERON:0002417!6.45e-07!61;UBERON:0000916!6.45e-07!61;UBERON:0006947!7.60e-07!3;UBERON:0004054!7.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.00e-31;17!UBERON:0005409;1.72e-24;22!UBERON:0002108;3.98e-22;4!UBERON:0002107;1.49e-15;19!UBERON:0006925;1.49e-15;19!UBERON:0004921;7.35e-15;33!UBERON:0001155;3.10e-12;9!UBERON:0002423;8.24e-12;25!UBERON:0000059;4.10e-10;11!UBERON:0001007;3.00e-09;81!UBERON:0002365;3.61e-09;31!UBERON:0002330;3.61e-09;31!UBERON:0002368;2.28e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.92e-31,17;UBERON:0002108,3.57e-22,4;UBERON:0005409,1.28e-21,25;UBERON:0002107,1.42e-15,19;UBERON:0006925,1.42e-15,19;UBERON:0008836,1.42e-15,19;UBERON:0008835,1.91e-13,22;UBERON:0003894,1.91e-13,22;UBERON:0009854,7.37e-13,23;UBERON:0004921,1.04e-12,118;UBERON:0001155,3.04e-12,9;UBERON:0007499,7.97e-12,25;UBERON:0009497,7.97e-12,25;UBERON:0000015,7.97e-12,25;UBERON:0002423,7.97e-12,25;UBERON:0006235,7.97e-12,25;UBERON:0004161,7.97e-12,25;UBERON:0009856,2.29e-11,26;UBERON:0000059,4.03e-10,11;UBERON:0001007,4.70e-10,145;UBERON:0001555,4.70e-10,145;UBERON:0007026,4.70e-10,145;UBERON:0002365,1.61e-09,31;UBERON:0002330,1.61e-09,31;UBERON:0004119,5.83e-09,160;UBERON:0000925,5.83e-09,160;UBERON:0006595,5.83e-09,160;UBERON:0002368,2.03e-08,35;UBERON:0003929,1.48e-07,54;UBERON:0011216,5.28e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,2.91909962861019,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75117230842733,5.35703079477582,7.27958273625197,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0.348724276104376,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,1.34109717480496,0,0,0,0.485710993059139,0,0,0,0,0,0,7.48589333647063,3.71551252856727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@AK000735 | |||
}} |
Latest revision as of 09:35, 23 July 2015
Short description: | p2@AK000735 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK000735_5end |
Coexpression cluster: | C611_small_hepatocellular_colon_adenocarcinoma_Intestinal_signet_temporal |
Association with transcript: | 0bp_to_AK000735_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.64e-16 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.92e-31 | 17 |
small intestine | 3.57e-22 | 4 |
gastrointestinal system | 1.28e-21 | 25 |
liver | 1.42e-15 | 19 |
digestive gland | 1.42e-15 | 19 |
liver bud | 1.42e-15 | 19 |
hepatic diverticulum | 1.91e-13 | 22 |
liver primordium | 1.91e-13 | 22 |
digestive tract diverticulum | 7.37e-13 | 23 |
subdivision of digestive tract | 1.04e-12 | 118 |
colon | 3.04e-12 | 9 |
epithelial sac | 7.97e-12 | 25 |
epithelium of foregut-midgut junction | 7.97e-12 | 25 |
anatomical boundary | 7.97e-12 | 25 |
hepatobiliary system | 7.97e-12 | 25 |
foregut-midgut junction | 7.97e-12 | 25 |
septum transversum | 7.97e-12 | 25 |
sac | 2.29e-11 | 26 |
large intestine | 4.03e-10 | 11 |
digestive system | 4.70e-10 | 145 |
digestive tract | 4.70e-10 | 145 |
primitive gut | 4.70e-10 | 145 |
exocrine gland | 1.61e-09 | 31 |
exocrine system | 1.61e-09 | 31 |
endoderm-derived structure | 5.83e-09 | 160 |
endoderm | 5.83e-09 | 160 |
presumptive endoderm | 5.83e-09 | 160 |
endocrine gland | 2.03e-08 | 35 |
gut epithelium | 1.48e-07 | 54 |
organ system subdivision | 5.28e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.98e-07 | 2 |