FFCP PHASE1:Hg19::chr10:103210354..103210369,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:103210354..103210369,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_at_chr10:103210354..103210369,+ | |description=CAGE_peak_at_chr10:103210354..103210369,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!8.78e-12!2;CL:0000765!8.78e-12!2;CL:0000050!8.78e-12!2;CL:0000038!8.78e-12!2;CL:0000558!8.78e-12!2;CL:0000547!8.78e-12!2;CL:0000549!8.78e-12!2;CL:0000550!8.78e-12!2;CL:0000552!8.78e-12!2 | |ontology_enrichment_celltype=CL:0000764!8.78e-12!2;CL:0000765!8.78e-12!2;CL:0000050!8.78e-12!2;CL:0000038!8.78e-12!2;CL:0000558!8.78e-12!2;CL:0000547!8.78e-12!2;CL:0000549!8.78e-12!2;CL:0000550!8.78e-12!2;CL:0000552!8.78e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2 | |ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.49e-30,2;CL:0000765,4.49e-30,2;CL:0000050,4.49e-30,2;CL:0000038,4.49e-30,2;CL:0000558,4.49e-30,2;CL:0000547,4.49e-30,2;CL:0000549,4.49e-30,2;CL:0000550,4.49e-30,2;CL:0000552,4.49e-30,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!1.77e-15!8;DOID:8692!4.21e-09!31;DOID:1240!5.54e-07!39 | |ontology_enrichment_disease=DOID:1036!1.77e-15!8;DOID:8692!4.21e-09!31;DOID:1240!5.54e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.48e-26!15;UBERON:0000179!2.48e-26!15;UBERON:0000463!2.48e-26!15;UBERON:0003296!7.66e-12!4;UBERON:0010133!7.66e-12!4;UBERON:0001905!5.53e-11!2;UBERON:0002757!5.53e-11!2;UBERON:0010134!5.53e-11!2;UBERON:0002784!5.53e-11!2;UBERON:0005408!5.53e-11!2;UBERON:0001899!5.53e-11!2;UBERON:0007023!7.79e-09!115;UBERON:0001894!5.95e-07!7;UBERON:0006222!5.95e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!2.48e-26!15;UBERON:0000179!2.48e-26!15;UBERON:0000463!2.48e-26!15;UBERON:0003296!7.66e-12!4;UBERON:0010133!7.66e-12!4;UBERON:0001905!5.53e-11!2;UBERON:0002757!5.53e-11!2;UBERON:0010134!5.53e-11!2;UBERON:0002784!5.53e-11!2;UBERON:0005408!5.53e-11!2;UBERON:0001899!5.53e-11!2;UBERON:0007023!7.79e-09!115;UBERON:0001894!5.95e-07!7;UBERON:0006222!5.95e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-59;15!UBERON:0000179;4.94e-59;15!UBERON:0000463;4.94e-59;15!UBERON:0002390;1.99e-32;32!UBERON:0002193;4.31e-18;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-59;15!UBERON:0000179;4.94e-59;15!UBERON:0000463;4.94e-59;15!UBERON:0002390;1.99e-32;32!UBERON:0002193;4.31e-18;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.14e-59,15;UBERON:0000179,5.14e-59,15;UBERON:0000463,5.14e-59,15;UBERON:0007023,2.05e-11,114;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0002193,1.41e-09,108;UBERON:0004535,1.46e-07,109;UBERON:0001009,2.43e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.5897382896845,28.4964641617142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,2.29391162142713,1.13929437434833,0.476463550915578,1.64544909234478,2.59389324477087,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38524393686274,0.540911356951966,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0.392125068635479,0.503464760927528,0.569261198172555,2.54298526368606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0,9.27548222385549,0,0,0,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.672567444437648,0.606965604236632,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659643100472575,0,0,0,0,0,0,0,0,0.4226557275834,0,0,1.48253142339228,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.5897382896845,28.4964641617142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,2.29391162142713,1.13929437434833,0.476463550915578,1.64544909234478,2.59389324477087,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38524393686274,0.540911356951966,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0.392125068635479,0.503464760927528,0.569261198172555,2.54298526368606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0,9.27548222385549,0,0,0,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.672567444437648,0.606965604236632,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659643100472575,0,0,0,0,0,0,0,0,0.4226557275834,0,0,1.48253142339228,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:103210354..103210369,+ | |short_description=p@chr10:103210354..103210369,+ | ||
}} | }} |
Latest revision as of 09:39, 23 July 2015
Short description: | p@chr10:103210354..103210369, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:103210354..103210369, + |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.49e-30 | 2 |
erythroblast | 4.49e-30 | 2 |
megakaryocyte-erythroid progenitor cell | 4.49e-30 | 2 |
erythroid progenitor cell | 4.49e-30 | 2 |
reticulocyte | 4.49e-30 | 2 |
proerythroblast | 4.49e-30 | 2 |
basophilic erythroblast | 4.49e-30 | 2 |
polychromatophilic erythroblast | 4.49e-30 | 2 |
orthochromatic erythroblast | 4.49e-30 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.14e-59 | 15 |
haemolymphatic fluid | 5.14e-59 | 15 |
organism substance | 5.14e-59 | 15 |
adult organism | 2.05e-11 | 114 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
hemolymphoid system | 1.41e-09 | 108 |
cardiovascular system | 1.46e-07 | 109 |
circulatory system | 2.43e-07 | 112 |