FFCP PHASE1:Hg19::chr10:1033341..1033346,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:1033341..1033346,+ | |||
|description=CAGE_peak_at_chr10:1033341..1033346,+ | |description=CAGE_peak_at_chr10:1033341..1033346,+ | ||
|id=chr10:1033341..1033346,+ | |id=chr10:1033341..1033346,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.23e-09!180;CL:0000393!2.27e-09!60;CL:0000211!2.27e-09!60;CL:0000548!5.24e-09!679;CL:0000004!5.24e-09!679;CL:0000255!5.24e-09!679;CL:0000012!8.25e-09!682;CL:0000183!2.26e-08!59;CL:0000192!7.41e-08!42;CL:0000514!7.41e-08!42;CL:0000187!7.60e-08!54;CL:0000220!1.72e-07!246;CL:0002321!2.60e-07!248;CL:0000680!3.99e-07!57;CL:0000056!3.99e-07!57;CL:0000355!3.99e-07!57;CL:0000359!4.09e-07!32;CL:0000144!6.15e-07!625;CL:0000222!7.63e-07!119;CL:0002594!8.75e-07!4;CL:0002620!9.25e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.23e-09!180;CL:0000393!2.27e-09!60;CL:0000211!2.27e-09!60;CL:0000548!5.24e-09!679;CL:0000004!5.24e-09!679;CL:0000255!5.24e-09!679;CL:0000012!8.25e-09!682;CL:0000183!2.26e-08!59;CL:0000192!7.41e-08!42;CL:0000514!7.41e-08!42;CL:0000187!7.60e-08!54;CL:0000220!1.72e-07!246;CL:0002321!2.60e-07!248;CL:0000680!3.99e-07!57;CL:0000056!3.99e-07!57;CL:0000355!3.99e-07!57;CL:0000359!4.09e-07!32;CL:0000144!6.15e-07!625;CL:0000222!7.63e-07!119;CL:0002594!8.75e-07!4;CL:0002620!9.25e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.11e-16;6!CL:0000404;2.11e-16;6!CL:1000306;8.88e-12;4!CL:0002547;8.88e-12;4!CL:0002620;1.46e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.34e-16,6;CL:0000031,2.34e-16,6;CL:0000404,2.34e-16,6;CL:0000047,2.04e-12,8;CL:1000306,8.65e-12,4;CL:0002547,8.65e-12,4;CL:0000057,6.02e-08,76;CL:0002620,1.42e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000031;2.11e-16;6 | |||
|ontology_enrichment_disease=DOID:2394!3.13e-07!14 | |ontology_enrichment_disease=DOID:2394!3.13e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!8.75e-07!4 | |ontology_enrichment_uberon=UBERON:0001310!8.75e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;8.88e-12;4!UBERON:0000415;8.88e-12;4!UBERON:0007240;8.88e-12;4!UBERON:0005742;8.88e-12;4!UBERON:0005734;8.88e-12;4!UBERON:0004664;8.88e-12;4!UBERON:0004663;8.88e-12;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,8.65e-12,4;UBERON:0007240,8.65e-12,4;UBERON:0005742,8.65e-12,4;UBERON:0005734,8.65e-12,4;UBERON:0004664,8.65e-12,4;UBERON:0004663,8.65e-12,4;UBERON:0004797,4.20e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,3.48900583986214,0,0,0,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,6.22323149822128,2.29469296599051,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22901344239952,0,0,0.600182192168805,0.103052529238439,2.06112432036503,0,0.675105328965065,0.194874010322397,1.7670364197088,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.70445216541493,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.234282829985426,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0.532685175939381,0.164254312027618,0,0,0.604297247958111,0,0,0,0,0,0,0.308061348417659,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.412164046590889,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,3.1481234683064,0,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0,0,0.405820753925408,0.92947049429925,0.563391205064483,0.143411352204052,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,1.27217764290547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,0,0,0,0,0,0,0,1.12527203925513,1.2378549293751,4.15440338029185,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0,0.521745061811734,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0.928067519756987,1.99047944349308,0,0,0,0,0,0.214441591374926,0.521988583930423,0.226705925512272,0.231522474323834,0.489473409012935,0.358177682162975,0,0.219284049578707,1.23682402162117,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0.118193840883968,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.853818767021724,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,3.48900583986214,0,0,0,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,6.22323149822128,2.29469296599051,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22901344239952,0,0,0.600182192168805,0.103052529238439,2.06112432036503,0,0.675105328965065,0.194874010322397,1.7670364197088,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.70445216541493,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.234282829985426,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0.532685175939381,0.164254312027618,0,0,0.604297247958111,0,0,0,0,0,0,0.308061348417659,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.412164046590889,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,3.1481234683064,0,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0,0,0,0.405820753925408,0.92947049429925,0.563391205064483,0.143411352204052,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,1.27217764290547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,0,0,0,0,0,0,0,1.12527203925513,1.2378549293751,4.15440338029185,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0,0.521745061811734,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0.928067519756987,1.99047944349308,0,0,0,0,0,0.214441591374926,0.521988583930423,0.226705925512272,0.231522474323834,0.489473409012935,0.358177682162975,0,0.219284049578707,1.23682402162117,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0.118193840883968,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.853818767021724,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:1033341..1033346,+ | |short_description=p@chr10:1033341..1033346,+ | ||
}} | }} |
Latest revision as of 09:39, 23 July 2015
Short description: | p@chr10:1033341..1033346, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:1033341..1033346, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.34e-16 | 6 |
neuroblast | 2.34e-16 | 6 |
electrically signaling cell | 2.34e-16 | 6 |
neuronal stem cell | 2.04e-12 | 8 |
fibroblast of tunica adventitia of artery | 8.65e-12 | 4 |
fibroblast of the aortic adventitia | 8.65e-12 | 4 |
fibroblast | 6.02e-08 | 76 |
skin fibroblast | 1.42e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
artery wall | 8.65e-12 | 4 |
tunica adventitia of artery | 8.65e-12 | 4 |
adventitia | 8.65e-12 | 4 |
tunica adventitia of blood vessel | 8.65e-12 | 4 |
aorta tunica adventitia | 8.65e-12 | 4 |
aorta wall | 8.65e-12 | 4 |
blood vessel layer | 4.20e-07 | 7 |