FFCP PHASE1:Hg19::chr10:110321594..110321618,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000366253_5end | |association_with_transcript=-21bp_to_ENST00000366253_5end | ||
|cluster_id=chr10:110321594..110321618,- | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_1_at_ENST00000366253_5end | |description=CAGE_peak_1_at_ENST00000366253_5end | ||
|id=chr10:110321594..110321618,- | |id=chr10:110321594..110321618,- | ||
|ontology_enrichment_celltype=CL:0000055!4.51e-21!180;CL:0002620!1.00e-14!23;CL:0005020!2.65e-10!6;CL:0002138!2.65e-10!6;CL:0005022!2.65e-10!6;CL:0000057!8.69e-10!75;CL:0002139!9.29e-10!24;CL:0000222!1.93e-09!119;CL:0000048!3.92e-09!430;CL:0000723!1.13e-08!436;CL:0002371!1.71e-08!591;CL:0000680!3.24e-08!57;CL:0000056!3.24e-08!57;CL:0000355!3.24e-08!57;CL:0000034!4.39e-08!444;CL:0000188!8.32e-08!9;CL:0000187!3.34e-07!54;CL:0000144!3.76e-07!625;CL:0000183!7.40e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.51e-21!180;CL:0002620!1.00e-14!23;CL:0005020!2.65e-10!6;CL:0002138!2.65e-10!6;CL:0005022!2.65e-10!6;CL:0000057!8.69e-10!75;CL:0002139!9.29e-10!24;CL:0000222!1.93e-09!119;CL:0000048!3.92e-09!430;CL:0000723!1.13e-08!436;CL:0002371!1.71e-08!591;CL:0000680!3.24e-08!57;CL:0000056!3.24e-08!57;CL:0000355!3.24e-08!57;CL:0000034!4.39e-08!444;CL:0000188!8.32e-08!9;CL:0000187!3.34e-07!54;CL:0000144!3.76e-07!625;CL:0000183!7.40e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.12e-15;6!CL:0002594;1.30e-13;4!CL:0002139;1.41e-10;24!CL:0002620;1.61e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.04e-15,6;CL:0002138,1.04e-15,6;CL:0005022,1.04e-15,6;CL:0002594,2.98e-13,4;CL:0002139,1.52e-10,24;CL:0002620,1.28e-08,23;CL:0000222,1.89e-08,121;CL:0000048,5.09e-07,427;CL:0000723,8.76e-07,433 | |||
|ontology_enrichment_development_v019=CL:0005022;1.12e-15;6 | |||
|ontology_enrichment_disease=DOID:2394!1.43e-12!14;DOID:120!5.58e-07!27 | |ontology_enrichment_disease=DOID:2394!1.43e-12!14;DOID:120!5.58e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.01e-19;14!DOID:120;2.21e-09;27!DOID:193;1.28e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.37e-20,14;DOID:120,2.02e-09,27;DOID:193,1.18e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000055!8.46e-13!69;UBERON:0002049!7.63e-11!79;UBERON:0007798!7.63e-11!79;UBERON:0002199!4.30e-10!45;UBERON:0002416!4.30e-10!45;UBERON:0001637!1.87e-09!42;UBERON:0003509!1.87e-09!42;UBERON:0004572!1.87e-09!42;UBERON:0004872!6.56e-09!84;UBERON:0000947!6.74e-09!21;UBERON:0010191!6.74e-09!21;UBERON:0001981!6.76e-09!60;UBERON:0007500!6.76e-09!60;UBERON:0004537!6.76e-09!60;UBERON:0006965!6.76e-09!60;UBERON:0004535!2.38e-08!110;UBERON:0002118!2.43e-08!5;UBERON:0004532!2.43e-08!5;UBERON:0002097!2.51e-08!40;UBERON:0000992!2.57e-08!13;UBERON:0004290!5.93e-08!70;UBERON:0001009!7.08e-08!113;UBERON:0001473!2.02e-07!8;UBERON:0004536!2.02e-07!8;UBERON:0006558!2.02e-07!8;UBERON:0000914!2.14e-07!83;UBERON:0002329!2.14e-07!83;UBERON:0003077!2.14e-07!83;UBERON:0003059!2.14e-07!83;UBERON:0007282!2.14e-07!83;UBERON:0009618!2.14e-07!83;UBERON:0007285!2.14e-07!83;UBERON:0001134!2.85e-07!61;UBERON:0002036!2.85e-07!61;UBERON:0003082!2.85e-07!61;UBERON:0002385!7.54e-07!63;UBERON:0001015!7.54e-07!63;UBERON:0000383!7.54e-07!63 | |ontology_enrichment_uberon=UBERON:0000055!8.46e-13!69;UBERON:0002049!7.63e-11!79;UBERON:0007798!7.63e-11!79;UBERON:0002199!4.30e-10!45;UBERON:0002416!4.30e-10!45;UBERON:0001637!1.87e-09!42;UBERON:0003509!1.87e-09!42;UBERON:0004572!1.87e-09!42;UBERON:0004872!6.56e-09!84;UBERON:0000947!6.74e-09!21;UBERON:0010191!6.74e-09!21;UBERON:0001981!6.76e-09!60;UBERON:0007500!6.76e-09!60;UBERON:0004537!6.76e-09!60;UBERON:0006965!6.76e-09!60;UBERON:0004535!2.38e-08!110;UBERON:0002118!2.43e-08!5;UBERON:0004532!2.43e-08!5;UBERON:0002097!2.51e-08!40;UBERON:0000992!2.57e-08!13;UBERON:0004290!5.93e-08!70;UBERON:0001009!7.08e-08!113;UBERON:0001473!2.02e-07!8;UBERON:0004536!2.02e-07!8;UBERON:0006558!2.02e-07!8;UBERON:0000914!2.14e-07!83;UBERON:0002329!2.14e-07!83;UBERON:0003077!2.14e-07!83;UBERON:0003059!2.14e-07!83;UBERON:0007282!2.14e-07!83;UBERON:0009618!2.14e-07!83;UBERON:0007285!2.14e-07!83;UBERON:0001134!2.85e-07!61;UBERON:0002036!2.85e-07!61;UBERON:0003082!2.85e-07!61;UBERON:0002385!7.54e-07!63;UBERON:0001015!7.54e-07!63;UBERON:0000383!7.54e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.30e-13;4!UBERON:0002118;7.24e-12;5!UBERON:0001473;1.15e-11;8!UBERON:0004536;1.15e-11;8!UBERON:0006558;1.15e-11;8!UBERON:0000992;1.76e-09;13!UBERON:0002465;2.96e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,2.98e-13,4;UBERON:0002118,7.15e-12,5;UBERON:0001473,1.09e-11,8;UBERON:0004536,1.09e-11,8;UBERON:0006558,1.09e-11,8;UBERON:0000992,1.60e-09,13;UBERON:0002465,2.84e-09,10;UBERON:0000055,3.15e-09,68;UBERON:0002049,1.34e-07,78;UBERON:0007798,1.34e-07,78;UBERON:0002329,2.54e-07,71;UBERON:0003059,2.54e-07,71;UBERON:0007282,2.54e-07,71;UBERON:0004290,2.54e-07,71;UBERON:0009618,2.54e-07,71;UBERON:0003077,3.55e-07,72;UBERON:0007285,3.55e-07,72;UBERON:0007524,4.91e-07,73 | |||
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|short_description=p1@ENST00000366253 | |short_description=p1@ENST00000366253 | ||
}} | }} |
Latest revision as of 10:15, 23 July 2015
Short description: | p1@ENST00000366253 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000366253_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -21bp_to_ENST00000366253_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.04e-15 | 6 |
endothelial cell of lymphatic vessel | 1.04e-15 | 6 |
vascular lymphangioblast | 1.04e-15 | 6 |
smooth muscle cell of the umbilical artery | 2.98e-13 | 4 |
endothelial cell of vascular tree | 1.52e-10 | 24 |
skin fibroblast | 1.28e-08 | 23 |
mesodermal cell | 1.89e-08 | 121 |
multi fate stem cell | 5.09e-07 | 427 |
somatic stem cell | 8.76e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 2.98e-13 | 4 |
right ovary | 7.15e-12 | 5 |
lymphatic vessel | 1.09e-11 | 8 |
lymph vasculature | 1.09e-11 | 8 |
lymphatic part of lymphoid system | 1.09e-11 | 8 |
female gonad | 1.60e-09 | 13 |
lymphoid system | 2.84e-09 | 10 |
vessel | 3.15e-09 | 68 |
vasculature | 1.34e-07 | 78 |
vascular system | 1.34e-07 | 78 |
somite | 2.54e-07 | 71 |
presomitic mesoderm | 2.54e-07 | 71 |
presumptive segmental plate | 2.54e-07 | 71 |
dermomyotome | 2.54e-07 | 71 |
trunk paraxial mesoderm | 2.54e-07 | 71 |
paraxial mesoderm | 3.55e-07 | 72 |
presumptive paraxial mesoderm | 3.55e-07 | 72 |
dense mesenchyme tissue | 4.91e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.37e-20 | 14 |
female reproductive organ cancer | 2.02e-09 | 27 |
reproductive organ cancer | 1.18e-08 | 29 |