FFCP PHASE1:Hg19::chr10:122552912..122552925,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_uc001lfa.1_5end | |association_with_transcript=-40bp_to_uc001lfa.1_5end | ||
|cluster_id=chr10:122552912..122552925,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_uc001lfa.1_5end | |description=CAGE_peak_1_at_uc001lfa.1_5end | ||
|id=chr10:122552912..122552925,- | |id=chr10:122552912..122552925,- | ||
|ontology_enrichment_celltype=CL:0000842!1.09e-18!3;CL:0000094!1.46e-18!8;CL:0000224!3.72e-14!4;CL:0000081!1.89e-13!11;CL:0000080!1.33e-09!6;CL:0000775!3.92e-09!3;CL:0000767!1.02e-08!3 | |ontology_enrichment_celltype=CL:0000842!1.09e-18!3;CL:0000094!1.46e-18!8;CL:0000224!3.72e-14!4;CL:0000081!1.89e-13!11;CL:0000080!1.33e-09!6;CL:0000775!3.92e-09!3;CL:0000767!1.02e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.94e-17;3!CL:0000226;3.48e-17;3!CL:0000842;3.48e-17;3!CL:0000094;1.94e-14;8!CL:0000081;1.15e-10;11!CL:0000771;2.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.94e-17,3;CL:0000226,3.20e-17,3;CL:0000842,3.20e-17,3;CL:0000094,1.94e-14,8;CL:0000081,1.15e-10,11;CL:0000771,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.15e-57!15;UBERON:0000179!5.15e-57!15;UBERON:0000463!5.15e-57!15;UBERON:0002390!1.13e-11!102;UBERON:0003061!1.13e-11!102;UBERON:0002193!2.40e-10!112;UBERON:0002106!1.29e-08!3;UBERON:0004854!1.29e-08!3;UBERON:0009034!1.29e-08!3;UBERON:0002095!1.29e-08!3;UBERON:0004782!1.29e-08!3;UBERON:0003281!1.29e-08!3;UBERON:0009664!1.29e-08!3;UBERON:0002296!1.29e-08!3;UBERON:0005602!1.29e-08!3;UBERON:0001179!1.29e-08!3;UBERON:0006293!1.29e-08!3;UBERON:0001009!9.95e-08!113;UBERON:0004535!8.28e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.63e-99;15!UBERON:0000179;4.63e-99;15!UBERON:0000463;4.63e-99;15!UBERON:0002390;4.16e-43;32!UBERON:0002193;1.50e-24;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.22e-99,15;UBERON:0000179,4.22e-99,15;UBERON:0000463,4.22e-99,15;UBERON:0002390,5.60e-14,98;UBERON:0003061,5.60e-14,98;UBERON:0004535,1.43e-12,109;UBERON:0002193,1.43e-12,108;UBERON:0001009,3.39e-12,112;UBERON:0007023,6.05e-08,114 | |||
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|short_description=p1@uc001lfa.1 | |short_description=p1@uc001lfa.1 | ||
}} | }} |
Latest revision as of 11:04, 23 July 2015
Short description: | p1@uc001lfa.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001lfa.1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -40bp_to_uc001lfa.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.94e-17 | 3 |
single nucleate cell | 3.20e-17 | 3 |
mononuclear cell | 3.20e-17 | 3 |
granulocyte | 1.94e-14 | 8 |
blood cell | 1.15e-10 | 11 |
eosinophil | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.22e-99 | 15 |
haemolymphatic fluid | 4.22e-99 | 15 |
organism substance | 4.22e-99 | 15 |
hematopoietic system | 5.60e-14 | 98 |
blood island | 5.60e-14 | 98 |
cardiovascular system | 1.43e-12 | 109 |
hemolymphoid system | 1.43e-12 | 108 |
circulatory system | 3.39e-12 | 112 |
adult organism | 6.05e-08 | 114 |