FFCP PHASE1:Hg19::chr10:133999316..133999326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:133999316..133999326,+ | |||
|coexpression_cluster_id=C2991 | |||
|description=CAGE_peak_at_chr10:133999316..133999326,+ | |description=CAGE_peak_at_chr10:133999316..133999326,+ | ||
|id=chr10:133999316..133999326,+ | |id=chr10:133999316..133999326,+ | ||
|ontology_enrichment_celltype=CL:0000624!4.57e-26!6;CL:0000791!2.24e-22!18;CL:0000789!2.24e-22!18;CL:0002420!2.24e-22!18;CL:0002419!2.24e-22!18;CL:0000790!2.24e-22!18;CL:0000084!1.50e-15!25;CL:0000827!1.50e-15!25;CL:0000842!1.70e-13!3;CL:0000898!2.20e-13!3;CL:0000838!5.11e-13!52;CL:0000623!7.11e-13!3;CL:0000825!7.11e-13!3;CL:0000542!1.03e-12!53;CL:0000051!1.03e-12!53;CL:0000224!3.08e-10!4;CL:0000815!1.51e-09!2;CL:0000792!1.51e-09!2;CL:0002677!1.51e-09!2;CL:0002087!2.38e-08!119;CL:0000080!5.83e-07!6 | |ontology_enrichment_celltype=CL:0000624!4.57e-26!6;CL:0000791!2.24e-22!18;CL:0000789!2.24e-22!18;CL:0002420!2.24e-22!18;CL:0002419!2.24e-22!18;CL:0000790!2.24e-22!18;CL:0000084!1.50e-15!25;CL:0000827!1.50e-15!25;CL:0000842!1.70e-13!3;CL:0000898!2.20e-13!3;CL:0000838!5.11e-13!52;CL:0000623!7.11e-13!3;CL:0000825!7.11e-13!3;CL:0000542!1.03e-12!53;CL:0000051!1.03e-12!53;CL:0000224!3.08e-10!4;CL:0000815!1.51e-09!2;CL:0000792!1.51e-09!2;CL:0002677!1.51e-09!2;CL:0002087!2.38e-08!119;CL:0000080!5.83e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000167;2.62e-23;1!CL:0000164;2.62e-23;1!CL:0000502;2.62e-23;1!CL:0000172;2.62e-23;1!CL:0000173;2.62e-23;1!CL:0000624;8.71e-16;6!CL:0000791;1.05e-11;18!CL:0000789;1.05e-11;18!CL:0002419;1.05e-11;18!CL:0000084;1.32e-08;25!CL:0000226;1.40e-08;3!CL:0000842;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.10e-23,1;CL:0000164,2.10e-23,1;CL:0000502,2.10e-23,1;CL:0000172,2.10e-23,1;CL:0000173,2.10e-23,1;CL:0002351,2.10e-23,1;CL:0000624,8.39e-16,6;CL:0000791,1.03e-11,18;CL:0000789,1.03e-11,18;CL:0002420,1.03e-11,18;CL:0002419,1.03e-11,18;CL:0000790,1.03e-11,18;CL:0000226,1.30e-08,3;CL:0000842,1.30e-08,3;CL:0000084,1.30e-08,25;CL:0000827,1.30e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002351;2.62e-23;1!CL:0000790;1.05e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;2.62e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0003296!1.30e-10!4;UBERON:0010133!1.30e-10!4;UBERON:0000007!8.25e-10!2 | |ontology_enrichment_uberon=UBERON:0003296!1.30e-10!4;UBERON:0010133!1.30e-10!4;UBERON:0000007!8.25e-10!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.24e-12;2!UBERON:0002757;3.24e-12;2!UBERON:0010134;3.24e-12;2!UBERON:0005408;3.24e-12;2!UBERON:0001899;3.24e-12;2!UBERON:0003296;9.63e-07;4!UBERON:0010133;9.63e-07;4!UBERON:0002784;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.62e-12,2;UBERON:0002757,3.62e-12,2;UBERON:0010134,3.62e-12,2;UBERON:0005408,3.62e-12,2;UBERON:0001899,3.62e-12,2 | |||
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|short_description=p@chr10:133999316..133999326,+ | |short_description=p@chr10:133999316..133999326,+ | ||
}} | }} |
Latest revision as of 11:44, 23 July 2015
Short description: | p@chr10:133999316..133999326, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:133999316..133999326, + |
Coexpression cluster: | C2991_CD4_somatostatinoma_CD8_Peripheral_Natural_retinoblastoma_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.10e-23 | 1 |
enteroendocrine cell | 2.10e-23 | 1 |
type D enteroendocrine cell | 2.10e-23 | 1 |
somatostatin secreting cell | 2.10e-23 | 1 |
pancreatic D cell | 2.10e-23 | 1 |
progenitor cell of endocrine pancreas | 2.10e-23 | 1 |
CD4-positive, alpha-beta T cell | 8.39e-16 | 6 |
mature alpha-beta T cell | 1.03e-11 | 18 |
alpha-beta T cell | 1.03e-11 | 18 |
immature T cell | 1.03e-11 | 18 |
mature T cell | 1.03e-11 | 18 |
immature alpha-beta T cell | 1.03e-11 | 18 |
single nucleate cell | 1.30e-08 | 3 |
mononuclear cell | 1.30e-08 | 3 |
T cell | 1.30e-08 | 25 |
pro-T cell | 1.30e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.62e-12 | 2 |
regional part of epithalamus | 3.62e-12 | 2 |
secretory circumventricular organ | 3.62e-12 | 2 |
circumventricular organ | 3.62e-12 | 2 |
epithalamus | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.10e-23 | 1 |