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FFCP PHASE1:Hg19::chr10:135352708..135352709,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:135352708..135352709,+
|DHSsupport=supported 
|short_description=p@chr10:135352708..135352709,+
|DPIdataset=robust
|description=CAGE_peak_at_chr10:135352708..135352709,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr10:135352708..135352709,+
|coexpression_cluster_id=C5
|description=CAGE_peak_at_chr10:135352708..135352709,+
|id=chr10:135352708..135352709,+
|ontology_enrichment_celltype=CL:0000181!1.17e-08!12;CL:0000417!1.17e-08!12;CL:0000668!1.17e-08!12;CL:0000414!1.17e-08!12;CL:0000412!1.17e-08!12;CL:0000182!1.17e-08!12
|ontology_enrichment_celltype_v019=CL:0000182;3.14e-14;12
|ontology_enrichment_celltype_v019_2=CL:0000182,3.14e-14,12
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:178!6.26e-12!1;DOID:326!6.26e-12!1;DOID:3978!6.26e-12!1;DOID:3394!6.26e-12!1;DOID:5844!6.26e-12!1
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001950!2.82e-12!20;UBERON:0001874!9.61e-12!1;UBERON:0002581!1.63e-11!1;UBERON:0002619!3.34e-11!22;UBERON:0001869!6.10e-11!32;UBERON:0002791!1.31e-10!33;UBERON:0002020!2.71e-10!34;UBERON:0003528!2.71e-10!34;UBERON:0001893!2.71e-10!34;UBERON:0000956!6.73e-10!25;UBERON:0000203!6.73e-10!25;UBERON:0002107!2.49e-09!19;UBERON:0006925!2.49e-09!19;UBERON:0008836!2.49e-09!19;UBERON:0002780!1.64e-08!41;UBERON:0001890!1.64e-08!41;UBERON:0006240!1.64e-08!41;UBERON:0003080!2.64e-08!42;UBERON:0008835!4.44e-08!22;UBERON:0003894!4.44e-08!22;UBERON:0000200!9.33e-08!6;UBERON:0009854!9.84e-08!23;UBERON:0007499!3.99e-07!25;UBERON:0009497!3.99e-07!25;UBERON:0000015!3.99e-07!25;UBERON:0002423!3.99e-07!25;UBERON:0006235!3.99e-07!25;UBERON:0004161!3.99e-07!25;UBERON:0005057!7.42e-07!26;UBERON:0009856!7.42e-07!26
|ontology_enrichment_uberon_v019=UBERON:0002107;1.53e-19;19!UBERON:0006925;1.53e-19;19!UBERON:0002423;4.50e-15;25!UBERON:0002365;1.05e-12;31!UBERON:0002330;1.05e-12;31!UBERON:0002368;9.46e-10;33!UBERON:0000949;1.81e-08;43!UBERON:0005172;6.67e-07;52!UBERON:0005173;6.67e-07;52
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.48e-19,19;UBERON:0006925,1.48e-19,19;UBERON:0008836,1.48e-19,19;UBERON:0008835,5.13e-17,22;UBERON:0003894,5.13e-17,22;UBERON:0009854,2.57e-16,23;UBERON:0007499,4.40e-15,25;UBERON:0009497,4.40e-15,25;UBERON:0000015,4.40e-15,25;UBERON:0002423,4.40e-15,25;UBERON:0006235,4.40e-15,25;UBERON:0004161,4.40e-15,25;UBERON:0009856,1.55e-14,26;UBERON:0002365,2.48e-12,31;UBERON:0002330,2.48e-12,31;UBERON:0002368,5.12e-11,35;UBERON:0000949,9.62e-09,45;UBERON:0003929,2.08e-07,54;UBERON:0005172,2.08e-07,54;UBERON:0005173,2.08e-07,54;UBERON:0002530,7.68e-07,59;UBERON:0002417,9.72e-07,60;UBERON:0000916,9.72e-07,60
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|short_description=p@chr10:135352708..135352709,+
}}
}}

Latest revision as of 11:55, 23 July 2015

Short description:p@chr10:135352708..135352709, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr10:135352708..135352709, +
Coexpression cluster:C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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